Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00933 ATGAAGCTCTCCTTCTCGATCCCCTCGAAGTCCTCTTCCTCCTCCAATCCCATCAAACTCGACCACTCCTCCAAAAACGACGCCCCACCCTCCAAGCACTTCGTCACCGAATTCGACCCTTCCAAACCCCCAACTGAACAAACCGCCACCGTTATACCCCCGATCCAGAACGAATGGCGCCCCACCAAGAAGATGAAGAACCTCGAGCTTCCCATTACCGACCCCAACGCTGACCATCAATCCCTCGAATTCGAGCACGATTCCAATGCCGCGGATGCAGAACCCTGCACCGACATGTCCTACGGTCTCAACCTGCGACAAGCCGCCGAGAAAAATGGAAAAACCGGTGAACTCGCTGATGATGAGGATGATAGGGTTCCGCGGCAACGGCCGGAGGTGGCGTTGCTGCAGAAGTTTAAGGACGATTTGAAGCGGCTGCCTGATCACCAGGGGCTCGAGGAGTTTAATGATGTCCCTGTTGAGGGTTTCGGCAAGGCCTTGCTGGCCGGATATGGGTGGTCAGAAGGAATGGGAATAGGGCGGAATGCCAAGGAGGACGTTAAGATTGTGGAGTACAAGAGGAGGACTGCCAAGGAAGGGTTAGGATTTGTTGGCGATGATCGCGGTTCCGTTCGGAGCCAGAAGAAGGAGGAGAAGAAGAAAAGCAGGGAAGACAGTGGGAGAAATGATGCAGATTTTGTTAGTGAGAAGAAGATTGTGAGGATTATTGGGGGGAAAGATGCTGGATTGAAGGGTATTGTTGTGAGGAGAATTGGGGAGGATTGGATTGTTTTGAAGGTTTCAAGGAGTGGGGAAGAAGTGGAGGCTAGAGTGAGTGTGGATGATGTTGCTGAACTGGGATCTGCTGAGGAAGAGAGGTGCTTGAGGAAATTGAAGGAACTGAGGATTCGGCACAAGGGTGAAGATGATGGTAACAGGGAGAATGGTAGGGGTGACAAGGCTTCAAGGCATAAGCGTGAGAGAGAGCGAGGCGGAGTTGAGAAGACAACTCGAGTGAAAGCTAATGGGGGTGATCATAGGAAGGAAGATCAGCAGCGAGGAAGGAAACAGGTTTCTTGGCTCACAAGTCACATTCGAGTACGGGTTATTAGCCAGAACATTAAAGGAGGGCGGTTGTATTTGAAAAAGGCACAGGTTTTGGATGTTGTTGGGCCTTTGACTTGTGATATATCTATGGATGAGAGCAAAGAGATTGTTCAAGGAGTGTCCCAAGATATGCTGGAGACTGCGCTTCCTCGACGTGGGGGACCAGTTCTTGTGCTATCTGGTAAATATAAGGGCGCCTTTGGGAGCCTGGTTGAGAGGGATTTGGATCGGGAAGTTGGTGTTGTTCAGGATGCTGATACTCATGAGCTGCTCAATGTGAAGCTTGAACAGATTGCAGAAATCAAGAACACATACATCATAGAGGATCCTTTTGATGATCTTCATCAGCTAGCTGAGTTCATTCTTGAAGCTTCACCAGGAGGAAAACCTGAAGATGAACTCTTCTATTGTCAAAATGATTCCATTTGGCAAAAAGATGTTTATGGAGATTTGATTCATCTTCATATCACCAAGTTTGCGGACTTATTAATTCCATTGGACATGACCATTGTATCTCGAATTCCTGAGTTGGTTGAACTAAGCAGGGTTGGTGATGTGGGTAGAAGCTCTTGTACTTACACTCCGATTTGA 1698 0.487 MKLSFSIPSKSSSSSNPIKLDHSSKNDAPPSKHFVTEFDPSKPPTEQTATVIPPIQNEWRPTKKMKNLELPITDPNADHQSLEFEHDSNAADAEPCTDMSYGLNLRQAAEKNGKTGELADDEDDRVPRQRPEVALLQKFKDDLKRLPDHQGLEEFNDVPVEGFGKALLAGYGWSEGMGIGRNAKEDVKIVEYKRRTAKEGLGFVGDDRGSVRSQKKEEKKKSREDSGRNDADFVSEKKIVRIIGGKDAGLKGIVVRRIGEDWIVLKVSRSGEEVEARVSVDDVAELGSAEEERCLRKLKELRIRHKGEDDGNRENGRGDKASRHKRERERGGVEKTTRVKANGGDHRKEDQQRGRKQVSWLTSHIRVRVISQNIKGGRLYLKKAQVLDVVGPLTCDISMDESKEIVQGVSQDMLETALPRRGGPVLVLSGKYKGAFGSLVERDLDREVGVVQDADTHELLNVKLEQIAEIKNTYIIEDPFDDLHQLAEFILEASPGGKPEDELFYCQNDSIWQKDVYGDLIHLHITKFADLLIPLDMTIVSRIPELVELSRVGDVGRSSCTYTPI 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00933 565 Gene3D - 364 418 - -
Aip09g00933 565 MobiDBLite consensus disorder prediction 1 62 - -
Aip09g00933 565 MobiDBLite consensus disorder prediction 307 356 - -
Aip09g00933 565 MobiDBLite consensus disorder prediction 41 55 - -
Aip09g00933 565 Pfam G-patch domain 147 204 IPR026822 -
Aip09g00933 565 MobiDBLite consensus disorder prediction 209 229 - -
Aip09g00933 565 MobiDBLite consensus disorder prediction 203 229 - -
Aip09g00933 565 ProSiteProfiles G-patch domain profile. 160 206 IPR000467 GO:0003676
Aip09g00933 565 SMART kow_9 418 445 IPR005824 -
Aip09g00933 565 SMART kow_9 233 260 IPR005824 -
Aip09g00933 565 MobiDBLite consensus disorder prediction 307 355 - -
Aip09g00933 565 MobiDBLite consensus disorder prediction 1 22 - -
Aip09g00933 565 PANTHER G PATCH AND KOW-CONTAINING 1 470 IPR045166 GO:0000398
Aip09g00933 565 SMART G-patch_5 158 204 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00933 Aip-Chr9 12447344 12451062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00933 311 452 C2H2 Transcription Factor Family AT1G55460 28.671 8.01e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00933 K13101 - gmx:100784983 481.1