Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00920 ATGGGGCGACGGTCAATGGCGACGGTGAGAATGGCGAAGGTGATGATGTCAATGGTGAAGGGTTTACGCGCGAAGGTGAACTGGTCAGTGCAGCAATGTGGTGAGTGGCGAGTGGTGAGTGGCGGTAATAGCTCTCACCCGCTCACACTGCTCTGCCTCCTGCATGTGGCCGCCTCCTCCGATCTCTCGGACCTCGCACCGCCACCAGCCTCCAACCCTTGCCACTTTGCGTCTTTGTGCGACCTCTGTGGCTCTGTCAAGTCCCAATTTTTTTCTCCGACAACCATTATTCCATTCTTCGGAGATCAATTCTTTTGGGGGGATAGAATCTATCAAAAAGGGCTAGGTCCAGCACCAATTCCAATTTCTCAGCTCACTCTTGAGAATTTATCAAATGCCATAAAGTTCATGCTCCAGCCAGAGGTGAAGTCTCAAGCAATGGAAGTTGCAAAGTTGATTAAGGATGAAGATGGTGTTACTGCAGCGGTTGATGCGTTTCACCGGCATCTACCTTCTGAGCTACCGCTTCCAACACCATCTCCGGTGGAGGATCACCCAAATGCTTTGCAGTGGTTTTTTTCTTCAAATATCCAAGTGGTGTTGTGTGCCTTGTGGTGGTGTATAGTGTTTTTTTCCCCACTCAGTAAAGTGCTCATTGTTTTGTATGAGACATTCCGAATGCATTCGTCAAAGTTTAGCTCTAGTGGCTCTCGTGACCTCCTTATCTGTGATGAGGCTCACAGACTAAAGAATGATCAGACGATAACAAACAGGGCATTGGCAGCTCTTCCATGTAAACGTAGAATTCTATTTTCAGGAACTCCTTTGCAGAATGACTTGGAGGAATTCTGTGGAAGTTGA 861 0.4797 MGRRSMATVRMAKVMMSMVKGLRAKVNWSVQQCGEWRVVSGGNSSHPLTLLCLLHVAASSDLSDLAPPPASNPCHFASLCDLCGSVKSQFFSPTTIIPFFGDQFFWGDRIYQKGLGPAPIPISQLTLENLSNAIKFMLQPEVKSQAMEVAKLIKDEDGVTAAVDAFHRHLPSELPLPTPSPVEDHPNALQWFFSSNIQVVLCALWWCIVFFSPLSKVLIVLYETFRMHSSKFSSSGSRDLLICDEAHRLKNDQTITNRALAALPCKRRILFSGTPLQNDLEEFCGS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00920 286 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 170 - -
Aip09g00920 286 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 92 202 - -
Aip09g00920 286 Gene3D Glycogen Phosphorylase B; 88 152 - -
Aip09g00920 286 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80B1 92 202 - -
Aip09g00920 286 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 177 286 IPR014001 -
Aip09g00920 286 Gene3D - 195 285 IPR038718 -
Aip09g00920 286 Pfam SNF2-related domain 216 284 IPR000330 GO:0005524|GO:0140658
Aip09g00920 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 284 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00920 Aip-Chr9 12239030 12244298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00920 93 193 Glycosyltransferase AT1G43620 73.333 1.01e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aip09g00920 SNF2_N 6e-11 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00920 K05841 - aip:107616738 298.13