Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00909 ATGTTGAGCTCACCTGAGGCGTTCTTGAGGCACACTAGTCCAATCAGCAGATGTTGCTTCTCTGCTTCCGGGAACAATATTGCTAGTGCTTCTCTAGATGGAATTGTTAGTGTATTGTACATAAAGTGCAGCCCTGTGGAACCTATTTTTGTATCTGCAGCAGCATCTGGAGGAATTGGTTTGTTAGCAGCAGGACAAAGTAGCACAATTACAGGAACATATGCAGGACAATTCATAACTGAAGGGTTTTTGAAGCTAAATATAAAGAAATGGTTGAGGTCATTGATTACTAGAAGTGGTGCTATTGTTCCAACAATGATAGCTGCTATAGTTTTTAATACATCAAAGAGTTCATTGGATACTATGAATGAATGGCTCAATGTGGTTCAGTCAATTCAAATTCCTTTTGCACTCATTCCACTTCTTACATTGGTGTCTAAAGAAGAGGTCATGGCTACCACCACCTACTCCACTTTTTTCTGGTCTCTGCCGTCACCGTCGCCGTTCAATCTGGCACTCGCTGCCAGTCTCGCCCATCTCCCGGCGTCGCTATTAGGCTCTTTCTCCCCGTCGTTCATTCTCAGTATCTCTCTTCTCTCTTTGAGTCGTCGCCAATGCCGTGGTACTCCGTCTCCCCCTTCATCCTCCACTTCCAGAGTTACAATGGAGCCTCAGCCTCGGGATGATCATGAGGGTGTTAGGAACGTGGATGATGACAACTTTATAGATGACACTGGGGTGGAAGCTGGTGGTTACTATTGGCAGTGA 768 0.4518 MLSSPEAFLRHTSPISRCCFSASGNNIASASLDGIVSVLYIKCSPVEPIFVSAAASGGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRSLITRSGAIVPTMIAAIVFNTSKSSLDTMNEWLNVVQSIQIPFALIPLLTLVSKEEVMATTTYSTFFWSLPSPSPFNLALAASLAHLPASLLGSFSPSFILSISLLSLSRRQCRGTPSPPSSSTSRVTMEPQPRDDHEGVRNVDDDNFIDDTGVEAGGYYWQ 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00909 255 MobiDBLite consensus disorder prediction 206 242 - -
Aip09g00909 255 MobiDBLite consensus disorder prediction 223 241 - -
Aip09g00909 255 PRINTS Natural resistance-associated macrophage protein signature 127 146 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00909 255 PRINTS Natural resistance-associated macrophage protein signature 65 84 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00909 255 PRINTS Natural resistance-associated macrophage protein signature 93 110 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00909 255 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 58 154 - -
Aip09g00909 255 MobiDBLite consensus disorder prediction 206 222 - -
Aip09g00909 255 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 58 154 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00909 255 SMART WD40_4 2 40 IPR001680 GO:0005515
Aip09g00909 255 Pfam Natural resistance-associated macrophage protein 53 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip09g00909 255 SUPERFAMILY WD40 repeat-like 9 59 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00909 Aip-Chr9 12118635 12123390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00909 58 152 Inorganic Solute Cotransporters AT1G47240 80.000 5.10e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00909 K21398 - gmx:100801411 172.555