Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00908 ATGGCTTTGGAGGAGGACTACTTCTACAACATACTTAGTCCAACAAATATTAGAAGTTTGAATTTGTCTTCATGGATTCCAGTAGATTCACCATGCTTGTTGGAGCATATAATTCTACCTGTGGAATTTGGATTCTTTCTGATATTGTTATTCCAACTTCTGAGGAAAAATTTGAACTTCATCAACAAGCAGAACAAAATCCCCTCAGATATGATTCATCAAACTATAACAACAAACCATGGTTTAGCTTACAAAATCAGCATAGTTCTCACCACTTTGATGGTAGCTCTTCATGCAGCAACTCTATCACTTATCATTTTCAATCATGAGACTCAATGCACTTCAAAATTCAAGGCTATTGCATCAGAAACAATTCAAGTTCTATCATGGGGTGTGAGTCTAATTGCAATTTTCAAGGTATCAAGAACAAGTTCTTATTTTCCTTGGATTCTCAGAGCTTGGTGGATTTGTAGTTTCATTTTGTGCATTGTTGGAACATCACTTCATACAATATTCAGTGTTAGCCAAAAGGGTCAAATTGGTTTAAGAGAATATGCAGATTTCATTGGTTTGGTTACTTCAACATTCTTATTGATTGTTTCAATTAGAGGGAAGAGTGACATTGTGTGTGTTCAAAAAAGTGAGGTAACTGAACCACTTCTGAGTTCAAAACCTGGTAAAACTTCAGAATTTCCAAAGGAATCTCCATATGGAAAGGCTACTTTGATGCAACTCATCAACTTCTCTTGGCTCAATCCATTGTTTGAAGAAGGTTACAAGAAACCTCTTGAGCAAAGTGACATTCCTAATGTTGATATCAAGGACTCGGCCGAGTTTCTAACCTCGGCCTTCGACGAGAGCCTTAGGCAGGTAAAGGAGAAAGATGGAACTACAAACCCCTCTATTTACAAGGCAATCTATCACTTCACCAGGAAGAAAGCAGCAATCAATGCGCTTTTCGCCATAATATGCGCTTCGGCTTCATATGTTGGTCCATACTTGATCACTGACTTTGTTGATTTCTTGGGGGACAAGGAAAAGCAGGGGTTGAAAACAGGGTATCTTCTTTCACTAGCATTCTTGTGTGCTAAGATGGTTGAGACAATAACTCAGAGGCAATGGATTTTCGGTGCAAGGCAATTAGGCCTTCGCCTTAGATCTGCATTGATATCTCATATATATAAGAAGGGTCTGCATCTTTCGAATAGATCGCGACAAAGTCACACAGGCGGCGAGATAATGAACTATATGAGTGTTGATGTGCAGAGAATCACAGATTTCATTTGGTATGTCAATGTGATTTGGATGCTTCCTATACAAATTTCTTTAGCAGTGCTCATTTTGCATACAAATCTTGGATTAGGCTCCATGGCCGCGCTAGCTGCGACTCTAGCAGTGATGACTCTGAACATACCTCTTACCAAAATACAGAAAAGATACCAAGCAAAGATCATGGCAGCCAAAGATGAAAGAATGAAAGCAACTTCAGAAGTTCTGAGAAACATGAAAACTTTGAAGCTTCAAGCATGGGATAGTGAATTTCTTCAAAGGCTAGAATCATTGAGGAAAGTGGAGTATAATTGGTTACTGAAATCATTACAACAAGCAGCACTTTCTGCTTTTATCTTCTGGGGATCACCTACATTCATATCTGTGATAACCTTTTGGGCTTGTATGCTAATGGGAATCGAGCTAACGGCCGGAAGAGTCTTATCCGCATTCGCCACATTTAGAATGTTACAGGATCCTATTTTCAGCCTACCTGATTTACTCAATGTCATGGCTCAAGGGAAAGTTTCAGTTGATAGGATCGCTTCGTACCTTAGGGAGGAAGAAATCCAGCATGATGTCATTGAAAATGTATCAAGGGACAAAACAGAATTTGATGTAGTCATTGATAAAGGGAGATTCAGCTGGGATCCAGAGTCTAGAACTCCATCTATTGATCAAATAGAGTTGAAAGTTAAAAGAGGAATGAAGGTGGCGATTTGTGGATCGGTTGGTTCTGGAAAATCAAGCCTGCTGTCTGGTATTTTGGGAGAGATATATAAGCAATCCGGGAAAGTGAAGATCAGTGGAACCAAAGCTTATGTTCCACAGTCTCCATGGATTCTTACAGGGAATATTAGAGACAATATCACATTTGGAAAAGAGTATGATCCTGAAAAGTATGAGAAAACTGTCCAAGCTTGTGCATTAAAGAAGGACTTTGAGCTATTCTCTTGTGGTGATCTCACTGAGATTGGGGAAAGAGGGATCAACATGAGTGGTGGACAAAAGCAGAGGATTCAGATAGCGCGAGCCGTATACCAAGATGCTGATATATATCTTCTTGATGACCCTTTTAGCGCCGTCGATGCACATACCGGAACACACCTATTTAAAGAGTGTCTTATGGGGATTCTTAAAGAGAAAACCATACTTTTTGTTACACACCAAGTTGAATTTCTTCCAGCAGCAGATCTCATCCTGGTGATGCAAAATGGAAAAATTACACAAGCTGGAAAATTTGAAGAGCTTCTAAAGCAAAACATAGGATTTGAAGTCTTAGTTGGTGCTCATAGTAAAGCTCTCGAGTCGATTCTCACTGTCGAAAACTCAAGCAGAACAGCTCAAAATCCCATAGCTGAAGCAGAATCCAACTTAAATGCGAAACTCATGCACAAAGAACAGCATGACACAGTGGAAGATAATCCACCAGAGAGAAAAGGAAATGAAGGAAAATTGGTTCAAGATGAAGAAAGAGAAACAGGAAGCATATCAAAAGAAGTGTACTGGACTTATTTGACAACTGCGAAAGGAGGAGCATTGGTTCCGGTTATAATCTTAGCACAATCTTCATTCCAAATACTTCAGATTGCAAGTAACTATTGGATGGCTTGGGTTTGTCCTACAAGTAGTGATGCTAAGCCTATATTTGACATGAATTTCATACTTCTTATTTACATGGTTCTTTCTGTTTCTGGCGCGCTATGTGTTCTGGTGCGAGCCTTGTTGGTCGCATACACCGGCCTTTGGACAGCACAGACATTTTTCACAAGCATGCTGCATAGTGTGCTTAGAGCTCCAATGTCATTCTTTGATTCAACACCAACTGGAAGAATCTTGAACAGGGTCTCTACAGATCAAAGTATTCTAGATTTGGAGATGGCAACCAAATTAGGATGGTGTGCTTTCTCTGTAATACAAATTCTGGGAACTATTGCAGTGATGTCTCAGGTGGCATGGCAAGTTTTCGCCATTTTCATTCCGGTAACTGCAGTCTGCATATGGTATCAAAGATATTACACACCAACAGCAAGAGAACTGGCTCGCTTAGCACAGATACAAATTGCACCAATCCTCCACCATTTTGCAGAATCTTTAGCCGGAGCAGCGTCGATACGAGCTTTCGATCAAGAAGGCAGATTCATACATACAAATCTTGATCTTGTGGATGGCCATGCAAGGCCATGGTTTCATAATGTGTCTGCAATGGAATGGCTTTCTTTCAGATTGAACATACTTTCAAATTTTGTTTTTGCCTTCTCACTTGTTATGCTTGTGAGCCTCCCTGAAGGAATAATCAATCCAAGCATTGCAGGGTTGGCAGTAACATATGGGATCAATTTGAATGTGTTGCAAGCTCAAGTTATATGGAACATATGCAATGCTGAAAACAAGATGATCTCAGTTGAAAGAATTCTGCAATACAGAAATATAGCAAGTGAGGCACCACTTGTCATTCAGGACAGCAGGCCGCCGAGCAACTGGCCGGCGACCGGAACAATATGTTTCACAAATTTAGAGATACGCTATGCTGAACAACTCCCATCAGTTCTGAAACACATCACATGCACATTCCCGGGACAGAAGAAAATTGGCGTTGTAGGACGAACCGGAAGTGGAAAATCGACCCTTATTCAGGCGATTTTTAGGATTGTTGAGCCAAGAGAAGGAAGCATTGTGATTGACAATGTGGACATATGCAAGATAGGTCTGCATGACTTAAGGTCAAGGCTCAGCATCATCCCACAAGACCCTTCCATGTTTGAAGGCACTGTTAGGGGCAACTTGGACCCCTTGGAACTATACTCTGACACTCAAATCTGGGAGGCACTAGATAAATGTCAACTTGGTCAGCTAGTGAGGGAAAAGCAAGACAAGTTGGATAGCCCAGTGGTAGAAAATGGTGAGAATTGGAGTGTGGGACAAAGGCAACTATTTTGCCTAGGAAGAGCATTGCTGAAGAGAAGCAGCATATTAGTTCTTGATGAAGCAACTGCCTCTGTGGACTCTGCAACTGATGGGGTGATACAGCAGATCATCAGTCACGAGTTTAAAGATCGGACCGTCGTCACAATTGCTCATCGTATCCACACGGTTATAGACAGTGATCTTGTTTTGGTGCTCAGTGATGGGAGAATCGCCGAGTATGATGAGCCGTCGAAGTTACTTGAAAGAGAAGATTCCTTCTTCTATAAACTCATAAAGGAGTATTCAAGCAGATCAAGTGGCTTCAACAGCTTAGCAGCTCAACATGTTCAAAGCTAG 4533 0.4088 MALEEDYFYNILSPTNIRSLNLSSWIPVDSPCLLEHIILPVEFGFFLILLFQLLRKNLNFINKQNKIPSDMIHQTITTNHGLAYKISIVLTTLMVALHAATLSLIIFNHETQCTSKFKAIASETIQVLSWGVSLIAIFKVSRTSSYFPWILRAWWICSFILCIVGTSLHTIFSVSQKGQIGLREYADFIGLVTSTFLLIVSIRGKSDIVCVQKSEVTEPLLSSKPGKTSEFPKESPYGKATLMQLINFSWLNPLFEEGYKKPLEQSDIPNVDIKDSAEFLTSAFDESLRQVKEKDGTTNPSIYKAIYHFTRKKAAINALFAIICASASYVGPYLITDFVDFLGDKEKQGLKTGYLLSLAFLCAKMVETITQRQWIFGARQLGLRLRSALISHIYKKGLHLSNRSRQSHTGGEIMNYMSVDVQRITDFIWYVNVIWMLPIQISLAVLILHTNLGLGSMAALAATLAVMTLNIPLTKIQKRYQAKIMAAKDERMKATSEVLRNMKTLKLQAWDSEFLQRLESLRKVEYNWLLKSLQQAALSAFIFWGSPTFISVITFWACMLMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVMAQGKVSVDRIASYLREEEIQHDVIENVSRDKTEFDVVIDKGRFSWDPESRTPSIDQIELKVKRGMKVAICGSVGSGKSSLLSGILGEIYKQSGKVKISGTKAYVPQSPWILTGNIRDNITFGKEYDPEKYEKTVQACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTHLFKECLMGILKEKTILFVTHQVEFLPAADLILVMQNGKITQAGKFEELLKQNIGFEVLVGAHSKALESILTVENSSRTAQNPIAEAESNLNAKLMHKEQHDTVEDNPPERKGNEGKLVQDEERETGSISKEVYWTYLTTAKGGALVPVIILAQSSFQILQIASNYWMAWVCPTSSDAKPIFDMNFILLIYMVLSVSGALCVLVRALLVAYTGLWTAQTFFTSMLHSVLRAPMSFFDSTPTGRILNRVSTDQSILDLEMATKLGWCAFSVIQILGTIAVMSQVAWQVFAIFIPVTAVCIWYQRYYTPTARELARLAQIQIAPILHHFAESLAGAASIRAFDQEGRFIHTNLDLVDGHARPWFHNVSAMEWLSFRLNILSNFVFAFSLVMLVSLPEGIINPSIAGLAVTYGINLNVLQAQVIWNICNAENKMISVERILQYRNIASEAPLVIQDSRPPSNWPATGTICFTNLEIRYAEQLPSVLKHITCTFPGQKKIGVVGRTGSGKSTLIQAIFRIVEPREGSIVIDNVDICKIGLHDLRSRLSIIPQDPSMFEGTVRGNLDPLELYSDTQIWEALDKCQLGQLVREKQDKLDSPVVENGENWSVGQRQLFCLGRALLKRSSILVLDEATASVDSATDGVIQQIISHEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREDSFFYKLIKEYSSRSSGFNSLAAQHVQS 1510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00908 1510 CDD ABCC_MRP_domain1 630 830 - -
Aip09g00908 1510 Pfam ABC transporter transmembrane region 949 1184 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip09g00908 1510 Pfam ABC transporter transmembrane region 316 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip09g00908 1510 MobiDBLite consensus disorder prediction 890 915 - -
Aip09g00908 1510 SMART AAA_5 657 830 IPR003593 -
Aip09g00908 1510 SMART AAA_5 1283 1475 IPR003593 -
Aip09g00908 1510 Gene3D ABC transporter type 1, transmembrane domain 287 616 IPR036640 GO:0005524|GO:0016021
Aip09g00908 1510 PANTHER - 120 1500 - -
Aip09g00908 1510 Gene3D ABC transporter type 1, transmembrane domain 901 1238 IPR036640 GO:0005524|GO:0016021
Aip09g00908 1510 Coils Coil 477 497 - -
Aip09g00908 1510 Gene3D - 626 856 IPR027417 -
Aip09g00908 1510 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1257 1491 IPR003439 GO:0005524
Aip09g00908 1510 SUPERFAMILY ABC transporter transmembrane region 311 612 IPR036640 GO:0005524|GO:0016021
Aip09g00908 1510 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 853 IPR003439 GO:0005524
Aip09g00908 1510 Gene3D - 1240 1493 IPR027417 -
Aip09g00908 1510 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 940 1220 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip09g00908 1510 CDD ABCC_MRP_domain2 1255 1475 - -
Aip09g00908 1510 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 315 596 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip09g00908 1510 CDD ABC_6TM_ABCC_D2 938 1231 IPR044726 GO:0140359
Aip09g00908 1510 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 120 1500 - -
Aip09g00908 1510 ProSitePatterns ABC transporters family signature. 755 769 IPR017871 GO:0005524
Aip09g00908 1510 SUPERFAMILY ABC transporter transmembrane region 940 1233 IPR036640 GO:0005524|GO:0016021
Aip09g00908 1510 Pfam ABC transporter 1274 1422 IPR003439 GO:0005524
Aip09g00908 1510 Pfam ABC transporter 649 782 IPR003439 GO:0005524
Aip09g00908 1510 CDD ABC_6TM_ABCC_D1 316 604 IPR044746 GO:0140359
Aip09g00908 1510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 625 846 IPR027417 -
Aip09g00908 1510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1247 1489 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00908 Aip-Chr9 12099573 12111099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00908 618 889 Calmodulin-binding Proteins AT2G36910 27.986 2.63e-23 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00908 - - gmx:100809749 2459.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00908 09 12099573 12111099 Aip09g00908 09 12099573 12111099 ECH