Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00893 ATGTTTGTGGGATCAAGAAAATGGGTGGTATTGGTAGCAACAATATGGATACAAGCATTTACAGGAACAAACTTTGACTTCTCATCATACTCATCAGAGTTGAAATCTGTGCTCCAAATCACTCAGCTGCAGCTGAATTATCTCTCAGTTGCATCTGACATGGGAAAAGTATTTGGGTGGTGTTGTGGTGTGTCTCTCTTGTACTTTCCTTTGTGGGTTGTTCTGTTCATGGCTGCTTTCTTGGGTCTTCTTGGTTATGGCTTCCAGTGCCTTCTTATCAAGCAGCTCATTTCCTTGCCTTATTTTCTGGTGTTTCTCCTATGCTTGGTTGCAGGATGTAGCATCTGTTGGTTCAACACAATCTGCTATGTCTTATGCATCAAGCATTTCCCTTCTAACCGATCACTCGCGCTTTCCTTAAGCATAAGCTTCAATGGGGTAACTGCAGCTTTGTACACTCTCATTGCCAATGCAATAACCTCAAGTGATGACACACTCTACCTTTTGCTCAATGCCATTGTCCCTTTACTTATTTCCGCGGTGGTACTAGTCCCAATCCTCCAACAGCCGCAGCCTCAGCCGAATTCGGCCGACATGATCCGGCGTGATTCCTTAGTTTTCCTCTGCCTCAACATCCTTGCACTCGTGACCGGCCTCTACCTCTTGTTCCTGTATTCCCTCTCTTCCAGCACAACCATCGCGCGTGTCATTCTCGTTGGCGCCGGATTTCTACTAGTGCTTCTCTTGTTCTTGCCTGTGATTGTGAATTCTAGAGAATGGTCTTGCCTTACTAGCCCTGCTTGTTATCCGCTTTTGAATTCGAGGTTCAATCTCATTAACCTTGATGGTGGTGGCGGTGACGATGATGATTATGATGATGATCTTCATAAAGAACTCATTGAGAATGAGGACAATTATTCAAGAAATAGAAGTAGTGTAATTGTAAGAGAGAAGTGTTGTTTTGATAATGTGTTGTTGAAAGATCAACTTAAGGTTCTTGGAGAAGAGCATTCAACTAAAATGCTTATGCATAGATGGGACTTTTGGATTTATTACATGGCTTATTTATGTGGAGGAACAATGGGATTGGTCTATAGTAACAACTTGGGTCAAATTTCTCAATCATTGGGACACAATTCTCAGACAAAAACTCTTGTCACACTTTACTCCACGTGTTCTTTCTTCGGTCGCCTGCTCGCCGCCGCACCTGACTTCTTGAACAGGAAGATACACTTTGCAAGAACAGGATGGTTTGCAGCAGCAGTAGTACCAATGCCTATAGCATTCATTTTGCTCGCCATAACCGGCAGCATCGAAGCATTGCGCATGAGCACGGCCTTAATCGGCCTAAGTTCCGGGTTTGTTTTCGCGGCAGCAGTTTCCATTACATCAGAGTTGTTTGGCCCAAACAGTGTTGCAGTGAACCACAACATACTAATCACCAACATTCCAATAGGGTCATGTCTTTATGGCCTTCTAGCAGCTCTGGTTTACGACTCGAACGCAGACGGCGCAAGCCGCGACACAATATGGCTGCGCGAGATGACAATGTGTATGGGGAGGAAGTGCTACCTTGAGACATTTTTATGGTGGAGTTGCATCTCCATTGTAGGATTGGTTTCAAGTTTTGTGCTATACTTTAGGACTAGGCATGCTTATTATGACAATTTTGGAAGAAATACAAATTGA 1689 0.4387 MFVGSRKWVVLVATIWIQAFTGTNFDFSSYSSELKSVLQITQLQLNYLSVASDMGKVFGWCCGVSLLYFPLWVVLFMAAFLGLLGYGFQCLLIKQLISLPYFLVFLLCLVAGCSICWFNTICYVLCIKHFPSNRSLALSLSISFNGVTAALYTLIANAITSSDDTLYLLLNAIVPLLISAVVLVPILQQPQPQPNSADMIRRDSLVFLCLNILALVTGLYLLFLYSLSSSTTIARVILVGAGFLLVLLLFLPVIVNSREWSCLTSPACYPLLNSRFNLINLDGGGGDDDDYDDDLHKELIENEDNYSRNRSSVIVREKCCFDNVLLKDQLKVLGEEHSTKMLMHRWDFWIYYMAYLCGGTMGLVYSNNLGQISQSLGHNSQTKTLVTLYSTCSFFGRLLAAAPDFLNRKIHFARTGWFAAAVVPMPIAFILLAITGSIEALRMSTALIGLSSGFVFAAAVSITSELFGPNSVAVNHNILITNIPIGSCLYGLLAALVYDSNADGASRDTIWLREMTMCMGRKCYLETFLWWSCISIVGLVSSFVLYFRTRHAYYDNFGRNTN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00893 562 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 556 - -
Aip09g00893 562 SUPERFAMILY MFS general substrate transporter 6 193 IPR036259 -
Aip09g00893 562 Gene3D MFS general substrate transporter like domains 314 551 IPR036259 -
Aip09g00893 562 PANTHER NODULIN-LIKE/MFS TRANSPORTER 5 556 - -
Aip09g00893 562 SUPERFAMILY MFS general substrate transporter 204 551 IPR036259 -
Aip09g00893 562 Pfam Nodulin-like 7 255 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00893 Aip-Chr9 11879280 11885624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00893 1 554 Nodulin-like Gene Family AT1G31470 54.301 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00893 - - gmx:100813947 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00893 09 11879280 11885624 Aip09g00893 09 11879280 11885624 ECH