Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00872 ATGCAGCAAGAAGCAGTGGATGCCACTACTCTTACCATGGACAAGCAGCACTCCCAACAAATGGAGCCGCAAGTGGAAGTGGCAGTGATAGATGGGAAGGAGTACTTTGTGAAGGTATTCTGTGAGCACAGAGCAGGTGGGTTTGTGAAATTGATGGAGGCACTCAACACCTTAGGCATGGATGTTGTACATGCCACTGTCACTAGCCACAAAGGCCTTGTCTCTAATGTCTTCAAAGTTGAGGTCAGATACCATTTAACTCATCATTCAAAACAAAATTAG 282 0.4539 MQQEAVDATTLTMDKQHSQQMEPQVEVAVIDGKEYFVKVFCEHRAGGFVKLMEALNTLGMDVVHATVTSHKGLVSNVFKVEVRYHLTHHSKQN 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00872 93 CDD ACT_UUR-ACR-like 37 80 - -
Aip09g00872 93 PANTHER TRANSCRIPTION FACTOR ABORTED MICROSPORES 11 83 - -
Aip09g00872 93 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 11 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00872 Aip-Chr9 11494426 11495041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00872 19 81 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 61.905 4.39e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00872 - - aip:110266750 189.889