Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00862 ATGGATTCCTTCATCTTCTTCCTTATCTCCATTGTTATCTCCTTGTGCTTCTGCTTCACCCTTCAAGCCCATGTCTTACCTTCTTCAAACTCCAACAATCCATTCCCCGAAGAAGCTCACCCCACCAAATCTGGTTACCTTCCAGTAGCTACCACGTCTTCTTCTGCAATCTTCTATGCTTTATATGAAGCTCAAAACTCAACCTTACCTCTCTCCAGAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGAACCTCCTCCATGCTTGGCAACCTCTATGCGGTTGGACCATGGCGTATCACAGAATCCATCACCCTTGAACCCAACCCTGGTGCTTGGAACAAGTTCTTTGGCGTTCTCTTTCTTGATAACCCCATTGGCACTGGATTCAGTATAGCCTCATCACCTCAAGAGATCCCAACAAATCAAGAAGGTATTTCCAAACACCTTTATGTTGCTATTACAACGTTTCTTCGACTTGATCCTGTTTACAAACACCGCCCTATTTATATTGTTGGCCAAAGTTATGGAGGAAAGTATGCGTCTACAACTGGAAATTACATATTGAAAAGAAATGCACAGTTGCATGCTTCTAAAAGAGTGAATCTTGTTGGTGTGGCTATCGGGAATGGAATAATTGAGGCAGTGACCCAATCACGCACGCTTCCGGCTAATGCTTATTATGTGGGTCTGATCAATGAGAGGCAAAAAAGTGAGTTGGAGAAGACTGCAGGGGGAAGACTCCAGGGGAAGTTGCAAAACATGTCAGGGCTGGCTACTTTGTATGATTACACAAGGAAAGATCATCTTTATCACTATCAAGATTGGATTAATCAATTCATGAATATAGCTGAAGTGAAGAAGGCATTGGGAGTGAACGAATCACAAGTCTTTAAAGTGTCCAGTAATGATATTAGAGCAGCGTTCCGAGGTGATATAATGAAGAGTGTCAAGTTTAGGGTAGAAGGGTTGTTGAGGAGCAATGCTATTAGGGTGTTGTTGTACCAAGGTCAATATGATTTGATTGCTGGTCCGGTGCAAACTGAGGCATGGGTGAATACTATGAAATGGGAAGGGATTGTGGAGTATGTGAATGCAGAGAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGGTATGTCCAACAATGGAAGTCACTCACCAATGTTGTGGTCTTGGGTGCTGGCCATCTTATGCCTGCTGACCAGCCTTTGAATGCTAAAGCAATGATTGAAGATTGGGTCTTGCAAAAGGGTATATTTGGAAATTCGCCTTCTTTTAAGTTTTGA 1293 0.4346 MDSFIFFLISIVISLCFCFTLQAHVLPSSNSNNPFPEEAHPTKSGYLPVATTSSSAIFYALYEAQNSTLPLSRTPLLIWLQGGPGTSSMLGNLYAVGPWRITESITLEPNPGAWNKFFGVLFLDNPIGTGFSIASSPQEIPTNQEGISKHLYVAITTFLRLDPVYKHRPIYIVGQSYGGKYASTTGNYILKRNAQLHASKRVNLVGVAIGNGIIEAVTQSRTLPANAYYVGLINERQKSELEKTAGGRLQGKLQNMSGLATLYDYTRKDHLYHYQDWINQFMNIAEVKKALGVNESQVFKVSSNDIRAAFRGDIMKSVKFRVEGLLRSNAIRVLLYQGQYDLIAGPVQTEAWVNTMKWEGIVEYVNAERKIWKVNGELAGYVQQWKSLTNVVVLGAGHLMPADQPLNAKAMIEDWVLQKGIFGNSPSFKF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00862 430 Pfam Serine carboxypeptidase 41 248 IPR001563 GO:0004185|GO:0006508
Aip09g00862 430 Pfam Serine carboxypeptidase 267 416 IPR001563 GO:0004185|GO:0006508
Aip09g00862 430 Gene3D alpha/beta hydrolase 19 423 IPR029058 -
Aip09g00862 430 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 421 IPR001563 GO:0004185|GO:0006508
Aip09g00862 430 SUPERFAMILY alpha/beta-Hydrolases 41 418 IPR029058 -
Aip09g00862 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Aip09g00862 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Aip09g00862 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Aip09g00862 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 388 401 IPR001563 GO:0004185|GO:0006508
Aip09g00862 430 PANTHER CARBOXYPEPTIDASE 25 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00862 Aip-Chr9 11334324 11335711 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00862 281 416 Calmodulin-binding Proteins AT2G22960 22.628 7.50e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00862 K09645 - gmx:100780822 550.821