Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00860 ATGGATTCCTTCATCTTCTTCCTTATCTCCATTGTTATCTCCTTGTGCTTCTGCTTCACCATTCAAGCCCATGTCTTACCTTCTTCAAACTCCAACAATCCATTCCCCGAAGAAGCTCACCCCACCAAATCTGGTTACCTTCCAGTAGCTACCACGTCTTCTTCTGCAATCTTCTATGCTTTATATGAAGCTCAAAACTCAACCTTACCTCTCTCCAGAACGCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGAACCTCCTCCATGATTGGCAACCTCTATGAGGTTGGACCATGGCGTATCACAGAATCCATCACCCTTGAACCCAACCCTGGTGCTTGGAACAGGTTCTTTGGCGTTCTCTTTCTTGATAACCCCATTGGCACTGGATTCAGTATAGCCTCATCACCTCAAGAGATCCCAACAAATCAAGAAGGTATTTCCAAACACCTTTATGTTGCTATTACAACGTTTCTTCGACTTGATCCTGTTTACAAACACCGCCCTATTTATATTGTTGGCCAAAGTTATGGAGGAAAGTATGCGTCTACAACTGGAAATTACATATTGAAAAGAAATGCACAGTTGCATGCTTCTAAAAGAGTGAATCTTGTTGGTGTGGCTATCGGGAATGGAATAATTGAGGCAGTGACCCAATCACGCACGCAACCGGCTAATGCTTATTATGTGGGTCTGATCAATGAGAGGCAAAAGAGTGAGTTGGAGAAGGATCAACTGGAAGTAGTTAGGTTGGCACAGATTGGGAACTGGAGTGAAGCAACGACTGCATGGGGAAGACTCCAGGGGAAGTTGCAAAACATGTCAGGGCTGGCTACTTTGTATGATTACACAAGGAAAGATCATCCTTATCACTATCAAGATTGGATTAATCAATTCATGAATATAGCTGAAGTGAAGAAGGCATTGGGAGTGAACGAATCACAAGTCTTTAAAGTGTCCAGTAATGATATTAGAGCAGCGTTCCAAGGTGATATAATGAAGAGTGTCAAGTTTAGGGTAGAAGGGTTGTTGAGGAGCAATGCTATTAGGGTGTTGTTGTACCAAGGTCAATATGATTTGACTGCTGGTCCGGTGCAAACTGAGGCATGGGTGAATACTATGAAATGGGAAGGGATTGTGGAGTATGTGAATGCAGAGAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGGTATGTCCAACAATGGAAGTCACTCACCAATGTTGTCGTCTTGGGTGGTGGCCATCTTTTGCCTGCTGACCAGCCTTTGAATGCTAAAGCAATGATTGAAGATTGGGTCTTGCAAAAGGGTATATTCTTTTGA 1326 0.4374 MDSFIFFLISIVISLCFCFTIQAHVLPSSNSNNPFPEEAHPTKSGYLPVATTSSSAIFYALYEAQNSTLPLSRTPLLIWLQGGPGTSSMIGNLYEVGPWRITESITLEPNPGAWNRFFGVLFLDNPIGTGFSIASSPQEIPTNQEGISKHLYVAITTFLRLDPVYKHRPIYIVGQSYGGKYASTTGNYILKRNAQLHASKRVNLVGVAIGNGIIEAVTQSRTQPANAYYVGLINERQKSELEKDQLEVVRLAQIGNWSEATTAWGRLQGKLQNMSGLATLYDYTRKDHPYHYQDWINQFMNIAEVKKALGVNESQVFKVSSNDIRAAFQGDIMKSVKFRVEGLLRSNAIRVLLYQGQYDLTAGPVQTEAWVNTMKWEGIVEYVNAERKIWKVNGELAGYVQQWKSLTNVVVLGGGHLLPADQPLNAKAMIEDWVLQKGIFF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00860 441 Pfam Serine carboxypeptidase 41 434 IPR001563 GO:0004185|GO:0006508
Aip09g00860 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Aip09g00860 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Aip09g00860 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Aip09g00860 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 406 419 IPR001563 GO:0004185|GO:0006508
Aip09g00860 441 PANTHER CARBOXYPEPTIDASE 25 437 - -
Aip09g00860 441 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 437 IPR001563 GO:0004185|GO:0006508
Aip09g00860 441 SUPERFAMILY alpha/beta-Hydrolases 41 436 IPR029058 -
Aip09g00860 441 Gene3D alpha/beta hydrolase 19 439 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00860 Aip-Chr9 11307101 11308485 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00860 301 434 Calmodulin-binding Proteins AT2G22960 23.704 5.15e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00860 K09645 - gmx:100780822 591.267