Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00851 ATGGTTCTTAGTGTTGTTTTTGGTTTCTTGGTGCTGATTAGTAGTTTTGGAACCGCATATGGGACTGATACTGATATCTTCTGCTTGAAGAGTATCAAGGGATCCATTGAAGACCCTTACAATTATTTGCAATCTTGGACTTTCAATAACAAAACCGAAGGGTTTATATGTAAATTCAGTGGGGTTGAGTGTTGGCACCCTGATGAGAACAGGGTCTTGAATCTCAAGCTCTCAAATATGGGGCTAAAGGGTCAGTTTCCCCGTGCCATTCGGAACTGCTCGAGTTTGACAGGGTTGGATCTTTCAATCAACAAGCTATCTGGAACGATTCCGGCGGATATATCCACTCTTCTGTTTTATGTGACTACTCTTGATCTATCATCAAATGAATTCTCCGGCACAATACCCGAAAGCCTTGCGAATTGTACCTATCTTAATACCCTTAAACTTGATTCTAATAGGCTTACTGGTCAAATTCCGGGAGAATTCGCCAGCCTCGGACGGCTGAAGACATTCAGTGTAACTAACAATCTTTTGTCCGGGCCAGTTCCAAACTTTAATTATACTAAAGTGACGGCTTCATATGGAAACAATCTAGGCCTATGTGGAGGAGGAACTAACTTGGGAGTTTGTCAGCCCCAGTCTTCCAAGAGTAACACTGCGGTCATAGCCGGAGCAGCCGTTGGTGGGGTGACTGTTGCGATGTTAGGATTGGGCATTGGAATGTTCTTCTATGTGCGCCGTGTCGGTTACAAGAGGAAGAAGGAAGAGGACCCCGAAGGAAACAAATGGGCGAGAAGTATAAAGGGAACCAAAGCAATAAAGGTTTCTTTGTTTGAGAAATCAGTTTCAAAAATGAAAATGAGTGATCTCATGAAGGCTACTAACAAGTTCAGTAACACCAATATCATCGGATCAGGACGAACGGGAACTGTTTACAAAGCTGTTCTTGAGGATGGCACATCACTTATGGTTAAGAGGTTGCAGCAATCCCAGCACTCCGAGAAAGAATTTAGGTCCGAGATGGCTACACTCGGGTCGGTCAAGCACCGAAACCTGGTTCCTCTCTTAGGATTTTGCATGGCCAAAAAGGAGAGGCTTGTGGTGTATAAAAATATGCCAAATGGAAACCTCTATGATCAGCTACATCCGGCCGAAGGCCCAAGCTCCCTTGACTGGACTCTAAGGCTCAAAATTGCAATTGGAGCTGCCAAAGGATTAGCATGGCTTCATCATAGCTGCAATCCCCGAATCATCCACCGAAACATAAGCTCTAAATGCATACTCTTGGATGCTGATTTCGAGCCCAAAATCTCCGACTTCGGTCTTGCCAGACTGATGAATCCTATAGATACTCATTTAAGTACTTTCGTCAACGGCGAGTTTGGAGACTTAGGATATGTTGCTCCAGAGTACACAAGAACCTTAGTTGCTACACCAAAGGGAGATGTTTATAGCTTTGGCACCGTGCTTCTCGAGTTGGTAACCGGCGAAAGACCTACCAATGTGGCTAAAGCTCCAGAAACATTCAAAGGGAATCTGGTGGAGTGGATTATGCAGCTCTCTAGCAACTCTCAACTCCATGACGCCATCGATGAGTCTCTAGCTGGAAAGGGAGTTGACAACGAGCTCTTCCAATTTCTGAAAGTTGCTTGCAACTGTGTTTCTTTAACTGCAAAGGAGAGACCAACCATGTTTGAAGTGTATCAGTTTCTAAGAGCAATTGGGAGTAGGTACAATTTCACTACTGAGGATGAGATTTTGATACCTGTAGATATTGGCACTGCTGATAACATGGAGGAACTTATTGTTGCTAGAGAAGGATTTGATGATTGA 1836 0.4401 MVLSVVFGFLVLISSFGTAYGTDTDIFCLKSIKGSIEDPYNYLQSWTFNNKTEGFICKFSGVECWHPDENRVLNLKLSNMGLKGQFPRAIRNCSSLTGLDLSINKLSGTIPADISTLLFYVTTLDLSSNEFSGTIPESLANCTYLNTLKLDSNRLTGQIPGEFASLGRLKTFSVTNNLLSGPVPNFNYTKVTASYGNNLGLCGGGTNLGVCQPQSSKSNTAVIAGAAVGGVTVAMLGLGIGMFFYVRRVGYKRKKEEDPEGNKWARSIKGTKAIKVSLFEKSVSKMKMSDLMKATNKFSNTNIIGSGRTGTVYKAVLEDGTSLMVKRLQQSQHSEKEFRSEMATLGSVKHRNLVPLLGFCMAKKERLVVYKNMPNGNLYDQLHPAEGPSSLDWTLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIMQLSSNSQLHDAIDESLAGKGVDNELFQFLKVACNCVSLTAKERPTMFEVYQFLRAIGSRYNFTTEDEILIPVDIGTADNMEELIVAREGFDD 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00851 611 Pfam Protein tyrosine and serine/threonine kinase 301 571 IPR001245 GO:0004672|GO:0006468
Aip09g00851 611 PANTHER RECEPTOR-LIKE PROTEIN 55 7 587 - -
Aip09g00851 611 Pfam Leucine rich repeat N-terminal domain 23 65 IPR013210 -
Aip09g00851 611 ProSiteProfiles Protein kinase domain profile. 298 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00851 611 PANTHER LRR RECEPTOR-LIKE KINASE 7 587 - -
Aip09g00851 611 SUPERFAMILY Protein kinase-like (PK-like) 277 572 IPR011009 -
Aip09g00851 611 Gene3D Transferase(Phosphotransferase) domain 1 373 589 - -
Aip09g00851 611 SUPERFAMILY L domain-like 23 186 - -
Aip09g00851 611 Gene3D Phosphorylase Kinase; domain 1 259 371 - -
Aip09g00851 611 Gene3D Ribonuclease Inhibitor 23 211 IPR032675 -
Aip09g00851 611 CDD STKc_IRAK 304 572 - -
Aip09g00851 611 Pfam Leucine rich repeat 121 179 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00851 Aip-Chr9 11146664 11149727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00851 9 598 Receptor kinase-like Gene Family AT3G28450 45.455 1.64e-180 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Aip09g00851 PK_Tyr_Ser-Thr 2.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00851 - - gmx:100801294 939.873