Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00828 ATGCGAGAGTCTCTTAGCCACATCTTGGTTCATTATTATCCCTTAGCTTGCAGGTTGAATTGGATCCAAGGTGATCGTTTGAAACTGGATTGTAACGCAAAAGGAGCCATGCTTCTTGAAGCCCAATCCAACAAATCAATGGCTGAATATGGAGACTTCTCACCAAATCAGCCAATCAAGGAACTCATCCCAACCGTTGATTATTCTCGCCCCATAGAGGAGCTTCCTTTGTTGCTCGCACAGATCACAAGGTTCAAAGAATTACAAGAAGGCATCGCCATTGGAATCGCTTTGTCTCATCCCTTATGTGATGGCCTTGCAGGCATTCACTTCATCAACTCATGGGCAAAGATGAGTAGAGGAGAGACATTGGAGGCAAGTGAATTGCCGTTTCATGACCGAACCTCACATGGGAACAAGTCCAAAAAACTGAAGAAAGATGCCAATAATGATAATAACGACTTCCAATCCCGGGAGCCTTATAGCAGATTTGAAGCCATTGGAGCACATCTATGGAGATCTGCTTGTAAGGCTCGTGAGCTTAGCAAACATCAACCAACTGTATTCCAGACGGTGGTTGATATTCGCAAGAAGCTGAATCCTCCTCTGCCTCAAAACTATTTTGGAAACGCTTTAGCTTTCACGAGTCGGAGAGATCGTGTCAAAGCCGCTGAGTTATGCTGCAAAGAACATAAGGGAAGCAGTGGAAAGAATTAA 717 0.4435 MRESLSHILVHYYPLACRLNWIQGDRLKLDCNAKGAMLLEAQSNKSMAEYGDFSPNQPIKELIPTVDYSRPIEELPLLLAQITRFKELQEGIAIGIALSHPLCDGLAGIHFINSWAKMSRGETLEASELPFHDRTSHGNKSKKLKKDANNDNNDFQSREPYSRFEAIGAHLWRSACKARELSKHQPTVFQTVVDIRKKLNPPLPQNYFGNALAFTSRRDRVKAAELCCKEHKGSSGKN 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00828 238 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 1 135 - -
Aip09g00828 238 Pfam Transferase family 2 135 - -
Aip09g00828 238 Pfam Transferase family 140 216 - -
Aip09g00828 238 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 135 - -
Aip09g00828 238 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 141 216 - -
Aip09g00828 238 Gene3D - 1 135 IPR023213 -
Aip09g00828 238 Gene3D - 137 233 IPR023213 -
Aip09g00828 238 MobiDBLite consensus disorder prediction 128 153 - -
Aip09g00828 238 MobiDBLite consensus disorder prediction 128 157 - -
Aip09g00828 238 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 141 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00828 Aip-Chr9 10731821 10733374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00828 1 237 Monolignol Biosynthesis Gene Families AT5G48930 33.333 2.14e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00828 K13065 - gmx:100787038 227.254