Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00822 ATGGAGAGTGAGACCCAAGGCCACCCTATAACATGCAAAGCGGCGGTTGCTAGAAGACCCGGTGAGCCATTGGTTATTGAGGACATCGTTGTGGCGCCGCCAAGCCCCCGTGAAGTTCGAATTCGTGTTATATGTGCCTCTCTCTGCGGCAGCGATGCTACTTTCTTGAAGCTCCAGGGAGGTCCTCCTGGATATTTTCCAAGAATTCTGGGTCATGAAGGAGTTGGGATTGTGGAAAGTGTAGGAAAAGATGTAGCTGAAGTTACAAAAGGAGATGTGGTTATTCCAATTTTTCTTCCAGATTGTGGAGAGTGTACAGATTGCAAATCAACAAAGAGCAATCGTTGTACTAATTTCCCTTTCCGGGTATCCCCATGGATGCCTCGAGATGGCACATCGAGATTCACCGATCTAAATGGAGATATCATATACCATTTCATGTTTATTTCAAGTTTCAGTGAGTACACTGTCGTTGATGTTGCCAATCTAATAAAGATTGGCCCAGAAACCCCCCCGGACAGGGCATGCCTGCTCGGTTGTGGCGTATCAACTGGGGTAGGTGCTGCTTGGAGAACAGCAAATGTGGAGCCTGGGTCTTCAGTGGCTATTTTTGGGCTGGGATCTGTTGGAATTGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCTACTAGGATTATAGGTGTGGATGTCAACTCGGAAAAATATGAAATTGGGAAAAAGTTTGGACTCACAGACTTCATCAATCCTAAAGAATGTGGGAACAAACCAGTGAGCCAGGTTATCATAGAGAAAACTGGCGGCGGAGCAGATTATTGCTTTGAGTGTGTTGGTATGGCATCATTGGTGCATGAAGCTTTTGCTTCTTGTAGAATGGGTTGGGGAAAAACAATTGTTGTAGGAGTGGACAAGCCAGGAGCCATGTTGAGCCTCAGTTCATATGAGGTACTTCATGATGGGAAGACCCTCATGGGATCCTTATTCGGAGGACTCAAACCTAAGACTCATGTCCCCATTCTCCTCAAAAAATACATGGACAAGGAACTGCAATTGGATGGGTTTGTTACTCATGAGGTGGAGTTTAAGGACATCAATAAAGCTTTTGATTTATTGTATAAAGGAGAGAGTCTCCGATGTGTGATTTGGATGCACAGATGA 1155 0.4545 MESETQGHPITCKAAVARRPGEPLVIEDIVVAPPSPREVRIRVICASLCGSDATFLKLQGGPPGYFPRILGHEGVGIVESVGKDVAEVTKGDVVIPIFLPDCGECTDCKSTKSNRCTNFPFRVSPWMPRDGTSRFTDLNGDIIYHFMFISSFSEYTVVDVANLIKIGPETPPDRACLLGCGVSTGVGAAWRTANVEPGSSVAIFGLGSVGIAVAEGARLCGATRIIGVDVNSEKYEIGKKFGLTDFINPKECGNKPVSQVIIEKTGGGADYCFECVGMASLVHEAFASCRMGWGKTIVVGVDKPGAMLSLSSYEVLHDGKTLMGSLFGGLKPKTHVPILLKKYMDKELQLDGFVTHEVEFKDINKAFDLLYKGESLRCVIWMHR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00822 384 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Aip09g00822 384 Pfam Alcohol dehydrogenase GroES-like domain 37 165 IPR013154 -
Aip09g00822 384 Gene3D - 15 377 - -
Aip09g00822 384 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 6 381 - -
Aip09g00822 384 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 171 345 IPR036291 -
Aip09g00822 384 SUPERFAMILY GroES-like 333 381 IPR011032 -
Aip09g00822 384 Gene3D - 185 325 - -
Aip09g00822 384 Pfam Zinc-binding dehydrogenase 209 329 IPR013149 -
Aip09g00822 384 PANTHER ALCOHOL DEHYDROGENASE 6 381 - -
Aip09g00822 384 SUPERFAMILY GroES-like 5 193 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00822 Aip-Chr9 10666966 10670888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00822 38 374 Monolignol Biosynthesis Gene Families AT2G21730 26.453 1.07e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00822 K00121 - gmx:100817521 663.299