Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00811 ATGAAGTTCAATATTGCAAATCCCACAACTGGATGCCAGAAGAAGCTCGAGATCGATGATGATCAGAAACTACGAGCATTTTGGGACAAGAGGATCTCACAGGAGGTCAATGGAGATGCTCTTGGTGAGGAGTTCAAAGGATATGTCTTTAAAATTACCGGTGGCTGTGACAAACAAGGTTTTCCAATGAAGCAGGGAGTGCTTACCCCTGGCCGTGTCCGTCTCTTGCTCCACAGAGGAACTCCATGCTTCCGTGGGTATGGAAGGCGTAACGGAGAGCGCCGGAGGAAGTCTGTTCGCGGTTGCATTGTCAGCCCAGACCTCTCTGTCTTGAACTTGGTGATTGTGAAGAAGGGTGACAATGATTTACCTGGATTGACTGATATTGAAAAGCCAAGAATGAGAGGCCCAAAGAGAGCATCCAAGATCCGTAAGCTGTTCAACCTTTCCAAGGAGGATGATGTGAGGAAATATGTCAACACATATCGCCGTACCTTCACTACAAAATCAGGTAAAAAGGTGAGCAAAGCTCCAAAGATTCAACGCCTGGTCACCCCATTGACACTGCAAAGGAAGCGTGCAAGGATTTCTGACAAGAAGAAGAGAATCGCAAAGGCAAAATCAGAGGCAGCTGAGTACCAGAAGCTTCTTGCCTCCAGGTTGAAGGAGCAGAGGGAACGGCGCAGTGAGAGTTTGGCAAAGAGGAGGTCCAAGCTTTCTAGTGCTGCTGCTAAAGCTACAACTTCATAA 750 0.476 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDNDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISDKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSSAAAKATTS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00811 249 MobiDBLite consensus disorder prediction 220 249 - -
Aip09g00811 249 PIRSF RPS6e 1 249 IPR014401 GO:0003735|GO:0005840|GO:0006412
Aip09g00811 249 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Aip09g00811 249 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Aip09g00811 249 Gene3D - 133 234 - -
Aip09g00811 249 Coils Coil 189 216 - -
Aip09g00811 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 244 IPR001377 GO:0003735|GO:0005840|GO:0006412
Aip09g00811 249 MobiDBLite consensus disorder prediction 220 235 - -
Aip09g00811 249 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Aip09g00811 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00811 Aip-Chr9 10550486 10553614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00811 1 249 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 71.486 1.09e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00811 K02991 - oeu:111409065 425.246