Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00801 ATGGAGAGGGTTGCAGAGCTGAAGGCACCTCCACGGACCTTGCCTACACTGGTGGAGGTATCAAATGCACACATGGCTGCAGCAAAGGAGGCTGGTCAGAGACGAAATGGGCCGGAGGTTGTAAGTGTTCGTGTGAACTATGGAAGAGAAGTGAATCAGTTGTCAAAAGCCAGGGATATGCCTGCTATGCGTCTGGCTTCCATCAGAGAAGTGGCTCAGTTGTCAAATGCACGATTCTTTTTGGAAAGAGATGATATGGTATTCGAATCTCGGAGCTCTGAAGAATCTCTCTGTTTTGCCCCGGCACCCCCTGGAATGTGGAAAGGAAAGGCCTCTTTACTAGAACCAGAAGAACTGGTGCTTGATTTTGACTCATTGAAGAGAAGCAGTGATTCATTGGAGGACAGTGGTTCTAGTTCATTTGCCGGTGCCAGTCATCCCCCGGAACCTGTTGATACAGATCTTATGAGAACGGTCTATGTACCAATAGGTCAAGGCAAAGCTGAGGCTAGATGCTTAATGAAGAGCATGTCCATGAAGGGTCCTTTCATAGAAGATCTCTCAATTCATGTTCCTGCAAAGAAACCAAGCCCAGCTGTTGTATCCCCTGAAGAAAGTCTTGTTGAAGAATTTAATGACATGAGACATGTATCCTCACCAATTTGGGGTCCTCGAGAATCACAGAATACCGAGAACTCTATACTCCCTGCAGATTCTGAGGAAAAGGAATGTGTTTGGGATGCTTCTTTGCCTCCTAGTGGCAATGTGAGTCCACTTAGCAGCATTGATAGCACCGGCATTGTCAGAGCAATGAGCATCGTTAATAGTTGTGCAAGTACATATCGGAGTGACGCAATGACTAGTGATGGCATGCTTAGTTTAGACAGAAACTGTGATAGTACTAAAGGGAGTATAAGGGGGGATTCACTGGAGAGTGCGAAAACTAGTGCTAGTCGGCCAAGTGATAGCAGCGGCCTTAGTGATGACAGCAACTGGAGCAACATCACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAATGCTATCCTTGCCATCCGATTAAGGGATGGAATTCTAGGCATGAGTCACTTCAGGTTACTCAAACGACTTGGCTGCGGAGATATTGGAAGTGTGTATCTCTCGGAGCTGAGTGGAACACGCTGTTATTTTGCGATGAAAGTTATGGATAAAGCGTCCCTAGCAGTCAGAAAGAAGCTCACTAGAGCACAGACAGAGAGGGAGATACTGCAGTTGCTGGATCATCCATTTCTACCAACTTTGTATACACATTTTGAGACTGACAGATTCTCCTGTTTGGTGATGGAATACTGTCCTGGCGGTGATTTACACACTTTAAGGCAGCGCCAACCTGGGAAACATTTCTCAGAATATGCTGCACGCTTTTATGCCGCGGAGGTGTTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTTGTATATAGGGACCTTAAACCTGAAAATGTCTTGGTCCGGGATGATGGTCACATAATGCTATCCGATTTTGATCTCTCCCTTAGATGCACCTTTTCTCCAACTCTTATTAGAACTTCTGATGGTGATCCTAAACGAGGTGGTGCATTTTGTGTCCAACCTGTTTGTATTGAACCATCATCAGCATGCATCCAACCTGCATGTTTCATTCCTAGACTCTTCCCTCAGAAAAACAAAAAGTCACGGAAACCCAGAGTCGAGCCTGGTTTGCCGTCCAGTACAATGCCAGAGCTTGTAGCCGAGCCAACTCAAGCTCGGTCTATGTCCTTTGTTGGGACCCACGAATACCTTGCCCCCGAGATCATTAAAGGAGAAGGTCATGGCAGTGCAGTTGATTGGTGGACATTTGGAATATTCTTGCATGAGCTATTATATGGCAAAACTCCTTTCAAAGGATCAGGAAACAGAGCTACACTCTTCAATGTAGTAGGCCAGCAGCTCAGGTTTCCCGAATCGCCAGCAACTAGTTATGCCAGCAGGGATCTGATCCGAGGATTGCTGGTGAAGGAGCCGCAGAATCGTCTTGGAGTTAAAAGAGGCGCAACCGAGATCAAGCAGCACCCCTTCTTTGAAGGTGTGAACTGGGCATTGATTAGGTGCAGCACGCCGCCAGAAGTGCCAAGACCAGTGGAAACTGAGCCGCCACCGAAGTTTGCACCCATTGATAATACTGCTGCTGCTGCTGCTGCTGCAGTTAGCAGCACTAGTAAGAGGATGGTAGGAACTGAGATGAGACCTGAGGGTAAATTTCTGGACTTTGAGTTCTTTTAG 2295 0.4675 MERVAELKAPPRTLPTLVEVSNAHMAAAKEAGQRRNGPEVVSVRVNYGREVNQLSKARDMPAMRLASIREVAQLSNARFFLERDDMVFESRSSEESLCFAPAPPGMWKGKASLLEPEELVLDFDSLKRSSDSLEDSGSSSFAGASHPPEPVDTDLMRTVYVPIGQGKAEARCLMKSMSMKGPFIEDLSIHVPAKKPSPAVVSPEESLVEEFNDMRHVSSPIWGPRESQNTENSILPADSEEKECVWDASLPPSGNVSPLSSIDSTGIVRAMSIVNSCASTYRSDAMTSDGMLSLDRNCDSTKGSIRGDSLESAKTSASRPSDSSGLSDDSNWSNITGSANKPHKGNDPRWNAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLAVRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTFSPTLIRTSDGDPKRGGAFCVQPVCIEPSSACIQPACFIPRLFPQKNKKSRKPRVEPGLPSSTMPELVAEPTQARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVETEPPPKFAPIDNTAAAAAAAVSSTSKRMVGTEMRPEGKFLDFEFF 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00801 764 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 76 764 - -
Aip09g00801 764 Gene3D Phosphorylase Kinase; domain 1 366 451 - -
Aip09g00801 764 SUPERFAMILY Protein kinase-like (PK-like) 349 723 IPR011009 -
Aip09g00801 764 Gene3D Transferase(Phosphotransferase) domain 1 593 716 - -
Aip09g00801 764 MobiDBLite consensus disorder prediction 131 151 - -
Aip09g00801 764 MobiDBLite consensus disorder prediction 303 344 - -
Aip09g00801 764 MobiDBLite consensus disorder prediction 303 341 - -
Aip09g00801 764 PANTHER FLIPPASE KINASE 1-RELATED 76 764 - -
Aip09g00801 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Aip09g00801 764 CDD STKc_phototropin_like 366 717 - -
Aip09g00801 764 MobiDBLite consensus disorder prediction 567 586 - -
Aip09g00801 764 Gene3D Transferase(Phosphotransferase) domain 1 452 522 - -
Aip09g00801 764 ProSiteProfiles Protein kinase domain profile. 368 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00801 764 Pfam Protein kinase domain 369 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00801 764 Pfam Protein kinase domain 595 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00801 764 SMART serkin_6 368 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00801 Aip-Chr9 10352152 10356222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00801 1 764 AGC Kinase Gene Family AT2G44830 64.743 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip09g00801 Pkinase 4.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00801 - - gmx:100800019 1214.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00801 09 10352152 10356222 Aip09g00801 09 10352152 10356222 ECH
Aip09g00801 09 10352152 10356222 Aip04g03158 04 125392305 125396166 PCT