Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00782 ATGGTAGTGGTTGAAAGAGATCAGAGGAGATTAACAGTTGGCGATGGGGTTCTAGAAGTATCTTTGGAGAGTTATGCGCCTGATGCAAAGATTATGACGAGAAACAACTTCCCTGCACTGAAATTTGAATCAGCAAATATGGATATTGAGAGTGCTATTATCCCTTTGCGCATCATTGAAAATGGGGAGTGTTTTGATTGTCCAGCACCAAATTTTGTCGTGACTGGTAATAATACCAGCACAATCACATTCCGGGGAGAGGTTTCTGGTCCTGTAACTAAAGCTAGTGATAGTTTGTTCATAACTGGAAGTGAGTTAACTTGTAAGAAGGAAACAGGTACAGATTCATTCATGCAATCTAATCTCTCTGTCAACCATGCTCAGTCAACTGGTTTCCAAGATACCTTACTTTGCAATGAGACCCTTGTTGGTAACATTGAATTGGGAAAGAAAATGGACAACTTTGACGCACTAGGGAGTGAATTGGTTGAGCAAAATAATATTGGTACTGCAGATAATATTTGTAAAACTAATACAAGCAAAGATCCAATAAGTGAATCGAAGAATGAAGATGAAGGCTTGCAAGTGGAAATTGATCCAAAGAAAGGGGTGATTGGTTTTGGCATGGAGAAAGAAAAGGAAGATGTATTTGAGAGGGGCCATATTGCACTTGTTGCAGAAGAACTAAAAAATGGTGTGGAACCAGAAAACCATGTATCTTTGTTAAATTTGGACAACAAAAAGTGTACAGTGAGAAACATGGGGACTTCAACTCCAAAGCAGCTTCTAAAATCTCCTTCCATATCAAAGGAAGGACAGAGGAATGATTTGCAACCAAAGTTACCAGTCCTCACAGAGTCACTAGCCTGTAACATATCTAATAAAACTCCAGAAGATGTTGATCAATGTAGAAATGATCAGACTCAGAAATGGCTTCAGAAGCCCAAGCGAAAGCAAAACCACAAGGAGAACCTAGTAGAAACTATCTCCGTTACTCCTAAGGTGGAGAAAAAAGCACATCCATCTTTTGAAGCCTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTTTACCGCGCCCGCAGAAAGACTGATGGAAAAAAACTTGCAATAAAATGTCCACATGATAATGCTCATAAAAACCATATAAATAATGAGCGAATTATGCTTGAGCGTTTTGGGGGTAAAAGCTTCATAATAAAGTTTGAAGGTTCTTTCAAAAGTGGCAGCAGTGACTGCTTTGTTTTAGAACATGTTGAGCATGACAGACCCGAGGTTTTGAAAAGAGAAATTGATATAGTTCAGCTTCAGTGGTATGCATATTGCTTGTTCAGAGCCCTTGCTTGCTTACACAAAGAGGGAGTTGTTCATCGAGATGTTAAACCTGGAAACTTCCTCTTTTCTCGAAAGCTAAGCAAGGGCTACCTCATTGATTTCAACCTTGCCATGGATTTAAAGCAGAAGTACAACAGTGGAAGTAAATCAAAACTAGGCCTCGATACATCAAACAATGTGCCTGTACCATCTGGCTCCCGCCCATTGGCCCATGAAAAGAACAATGGAGGAAGGAAGTCCATGACATTCAACAAAAGGGAATTGGCAGATTATAAGAAAAATTCTGAACTTATTAATAGGCATGCAAAGCAGAAAGCTTATGCTGGTTCTCCGAAAAACTGTGTTGGTAAGACCGGTGGAAATTTACTTAGAGCACAAGGAACAGAGGGCTCGGGTATAACCTCGGCAAAAGATGTTACAAGCACTCGGACTGCTTCTGCAGAAAGGCTCAGGGAGCCCCTGCCTACCCAAGGAAGAAAAGGGCTTATCAGTTTTCTGCATAATTCTGTGCAATCTGCAAGCAATAGCTCCATTAAAGGTCCTTCTTCCCAAAGGAAAAGAGTAACTGCCCCTTCAGGCAAGGTAGATGGCAAGATGGTTTATCTTACACCGATGCCTTTACATTCATCTGTTGCCGCTGGGTTATTGAGAAGCAAAGGAGATGGAAAACTCAAAAGAGAAGGTTCATGTGTCGGTACTAAGGGATTCCGTGCTCCTGAGGTTTTGCTTAAGTCTCAGTTTCAGGGACCAAAGGTTGATATTTGGTCAGCTGGAGTTACTTTGCTTTACATGGTGATTGGGAAGACTCCTTTCACTGGCGATCCAGAACAGAATATAAAAGACATTGCTAAGTTACGGGGCAGTGAAGAGCTTTGGGAAGTTGCAAAGCTACATGACCGTGAAATATCTTTTCCAATGGAGTTACTAGATGAACGGTACTTGCAAGCATGGGACATAGAAAAGTGGTGCAAGGTCAACACAAGGAGACCCGAGTTAGAAATCCCCAAATCATTGTTTGATCTAATAGATAAGTGTCTGACAGTGAATCCAAGAAATAGGGTCGGTGTTGAAGAAGCTTTAAGGCATGAGTTCTTTGCTTCATGCAATGAGACTATGAGAAAGGGAAGGATGATAAGAAGAGGTATCAGCTCAGATACTGCAGCTTCAAGCTCATTATGA 2523 0.4106 MVVVERDQRRLTVGDGVLEVSLESYAPDAKIMTRNNFPALKFESANMDIESAIIPLRIIENGECFDCPAPNFVVTGNNTSTITFRGEVSGPVTKASDSLFITGSELTCKKETGTDSFMQSNLSVNHAQSTGFQDTLLCNETLVGNIELGKKMDNFDALGSELVEQNNIGTADNICKTNTSKDPISESKNEDEGLQVEIDPKKGVIGFGMEKEKEDVFERGHIALVAEELKNGVEPENHVSLLNLDNKKCTVRNMGTSTPKQLLKSPSISKEGQRNDLQPKLPVLTESLACNISNKTPEDVDQCRNDQTQKWLQKPKRKQNHKENLVETISVTPKVEKKAHPSFEAFTIEEEEGSGGYGTVYRARRKTDGKKLAIKCPHDNAHKNHINNERIMLERFGGKSFIIKFEGSFKSGSSDCFVLEHVEHDRPEVLKREIDIVQLQWYAYCLFRALACLHKEGVVHRDVKPGNFLFSRKLSKGYLIDFNLAMDLKQKYNSGSKSKLGLDTSNNVPVPSGSRPLAHEKNNGGRKSMTFNKRELADYKKNSELINRHAKQKAYAGSPKNCVGKTGGNLLRAQGTEGSGITSAKDVTSTRTASAERLREPLPTQGRKGLISFLHNSVQSASNSSIKGPSSQRKRVTAPSGKVDGKMVYLTPMPLHSSVAAGLLRSKGDGKLKREGSCVGTKGFRAPEVLLKSQFQGPKVDIWSAGVTLLYMVIGKTPFTGDPEQNIKDIAKLRGSEELWEVAKLHDREISFPMELLDERYLQAWDIEKWCKVNTRRPELEIPKSLFDLIDKCLTVNPRNRVGVEEALRHEFFASCNETMRKGRMIRRGISSDTAASSSL 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00782 840 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 319 819 - -
Aip09g00782 840 MobiDBLite consensus disorder prediction 498 528 - -
Aip09g00782 840 MobiDBLite consensus disorder prediction 252 275 - -
Aip09g00782 840 Gene3D Transferase(Phosphotransferase) domain 1 308 502 - -
Aip09g00782 840 MobiDBLite consensus disorder prediction 621 640 - -
Aip09g00782 840 PANTHER CASEIN KINASE-RELATED 319 819 - -
Aip09g00782 840 MobiDBLite consensus disorder prediction 574 595 - -
Aip09g00782 840 ProSiteProfiles Protein kinase domain profile. 346 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00782 840 Pfam Protein kinase domain 348 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00782 840 Pfam Protein kinase domain 677 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00782 840 MobiDBLite consensus disorder prediction 498 512 - -
Aip09g00782 840 MobiDBLite consensus disorder prediction 621 637 - -
Aip09g00782 840 SUPERFAMILY Protein kinase-like (PK-like) 327 817 IPR011009 -
Aip09g00782 840 MobiDBLite consensus disorder prediction 574 596 - -
Aip09g00782 840 MobiDBLite consensus disorder prediction 252 274 - -
Aip09g00782 840 Gene3D Transferase(Phosphotransferase) domain 1 660 832 - -
Aip09g00782 840 SMART serkin_6 346 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00782 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00782 679 813 Core Cell Cycle Gene Families AT3G48750 33.333 1.79e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Aip09g00782 Pkinase 1.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00782 K02214 - gmx:100795742 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00782 09 9949997 9955688 Aip09g00782 09 9949997 9955688 ECH