Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00779 ATGGGTTTTGTTCATTTTGAAGATCACAACCAAGTTCTTAGCTTCTTGACACCTTCTCTTGCCGCTCCTCCAACTCTTTCTCATCACTCTCTAGAAGATGTTCGCGGCGGCAGTAATAGTGCTACTAATACAATTATTGCCGCCGCTACAACTTCTACAGCCACAGCCACAACCACAGTCGGGTTCGGCCATGACGAGCTTGTTCCAAGAGCTACTTGGAAAAACGATGACCAGGTTAGAAGCATGGATCCGAAGGGTATGAATAATAAGAATGATGAAAATTGCACTGGAAATAGTAGTGATGGAAACAACTCATCATGGTGGAGGAATGGAGGGTCAGAAAAGGGGAAGGTGAAAGTGAGGAGGAAGTTGAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTTGATGTTCTTGATGATGGTTACAAATGGAGAAAGTATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGCTACTACCGTTGCACACATAACAATTGTAGGGTGAAGAAAAGAGTTGAAAGGCTTTCTGAAGATTGTAGAATGGTTATTACAACCTATGAAGATTCTACCCTTTACTTAGATTAA 600 0.4183 MGFVHFEDHNQVLSFLTPSLAAPPTLSHHSLEDVRGGSNSATNTIIAAATTSTATATTTVGFGHDELVPRATWKNDDQVRSMDPKGMNNKNDENCTGNSSDGNNSSWWRNGGSEKGKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEDSTLYLD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00779 199 Pfam WRKY DNA -binding domain 141 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00779 199 SMART WRKY_cls 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00779 199 Gene3D WRKY domain 127 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip09g00779 199 MobiDBLite consensus disorder prediction 71 119 - -
Aip09g00779 199 MobiDBLite consensus disorder prediction 71 87 - -
Aip09g00779 199 MobiDBLite consensus disorder prediction 88 111 - -
Aip09g00779 199 SUPERFAMILY WRKY DNA-binding domain 132 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip09g00779 199 ProSiteProfiles WRKY domain profile. 135 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g00779 199 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 1 193 - -
Aip09g00779 199 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 193 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00779 Aip-Chr9 9874846 9883524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00779 82 192 WRKY Transcription Factor Family AT2G44745 73.684 8.65e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip09g00779 WRKY 1.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00779 - - adu:107464355 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00779 09 9874846 9883524 Aip09g00779 09 9874846 9883524 ECH