Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00763 ATGGGCATAGAAATTGTTAGGCAAGAAGCACCATCAAAACTTGGTAAACGCAGCAGATTATGCTTTTATGAAGATGTTCTTAGAGTATTGAGGGAAGATTCGGGAAGCAGTAACATTGAAGGAATAATGTTGGACCCTCCTAAAGAAGAAAATGTAATATGGAGCGGCACTGCCTTTCAGAAGATGAATAATATTCGAATTCTCATTGTTCGAAATACACATTTTATACCAGAGCCTAGTTATTTGCCGAACAGTCTAAGGTTACTCGAATGGGATAGGTACCCATCAAAATCTCTCCCGTCAAATTTTCATCCTAAGGATATTGTTGACCTGAGCTTACCGTGCAGTCAACTCAACTTGAAGATGGAAAAATCGTTTCAGAAAATGTTGCATTTGACATACATGAATTTGTCAATGTGCCAATTCATAACCCATTTTCCTGATGCGTCTGGTGTTCCGAACTTGAAAGAACTTAAGCTTAACTACTGTAAAAATCTGATTGCGATTCATCCCTCAGTTGGATTTCTTAAAAAGCTCAAACATCTAAGCGCATGTCATTGCATGAATCTCAAAGATTTCTCACCAACAATGTGGTTGCCATCTCTACAATATCTCAACCTTGATTCCACAAGTATTGAGTTCTTCCCACAAACAGAGAAAACAATGCATGAGCCACTAGAAATCACCATGCAAAATGATCGAATTAAGGAGCTTCCAAGTTCCATTAGTAATCTAATGGGACTTAGAAAATTATACATACAATTCAAAGGGCTTGTTCCTGGAGGCTTACCAAATGATCTATTCATGTTGCCAGAGATGGTATATTTGTCTATTTTCGATTCTCCTAATGTTGGAGAATCATTTAAAAGATTCCTAATAGATAAACCAGGATGCTATTCTCCTTTGAGATTGTTGAATTGTAGTGCTTGTGGTTTAACCGATGAAGATCTTCACGCTATTCTATGTTGTTCTCCCAACTTGGAAGAGTTATATGTACCTTGGAATGAATTTGTGTGCCTCCCAACCATCATTAAGGAATCTTCTAAATTGAGGTATCTCTGTGTAACTAGGTGCAAGAAGCTTTCGGAAATACCAGAATTGCCATCAAGTATAAAAGTTTTAGAAGCAAAAGAATGCTCCATCTTGTCTTCAAAAGCATCTGGGTTATTATGGTCTCAGGCTTTAAAGGAAGCATACAGGCTACAAATCATAATGCCAAAAATAACAATGATTCCAATTTGGTTTGACCACTGTTATGAAGGGGGAGTTGTGTCATTTTGGGCTCGTCAAAAGTTTCCTGTTCTTGCTGTAGCGTTTATCTTGAAGGAGAAAGCATCCATGGGCTCTGCAAATTTGTACATTAATGGTTGCAACGCTCATCAGTTTATTAGTAATAACTATTATTGCCCTTACGTCAAAGGAGAGCATGTGTTGCTATTTGACCTACGCAGTTTGTTTAAGGATGATGAGGAGTGGAGAATCCTCGACACCTTTCTAATCTATGAATGGAACTATGTGGAGGTTAAATATGAATGTGACAATTTGCTTTTAAATGATGTGGTTGGAATGTCTAATGTAAGTCACTGTGGAGCTTATGTGTACAAGGGACAATCAAACATGGAGGATATTCAATTTCAGTGTCCTTATTCAACAATAAACCCTGAAACACCCTCTCATTGCAGCTGCGCAACCAAAAGTATCAGCGTCTTCTCTTCTCCCATCGTTTCTCCCTATCCTTCCAAGATGACGAAGAGAACCAAGAAGGCCGGTATCGTTGGGAAATACGGCACCCGATATGGTGCTAGTTTAAGGAAGCAGATTAAGAAGATGGAAGTCAGCCAGCACAGCAAATTTTTCTGTGAGTTTTGCGGAAAGTATGCTGTTAAGAGAAAGGCTGTTGGTATTTGGGGATGCAAAGACTGCGGAAAGGTGAAGGCTGGAGGTGCCTATACTTTGAACACTGCGAGTGCTGTGACTGTTAGGAGCACAATTCGGAGGCTGAGGGAGCAGACTGAGAGTTGA 2022 0.3942 MGIEIVRQEAPSKLGKRSRLCFYEDVLRVLREDSGSSNIEGIMLDPPKEENVIWSGTAFQKMNNIRILIVRNTHFIPEPSYLPNSLRLLEWDRYPSKSLPSNFHPKDIVDLSLPCSQLNLKMEKSFQKMLHLTYMNLSMCQFITHFPDASGVPNLKELKLNYCKNLIAIHPSVGFLKKLKHLSACHCMNLKDFSPTMWLPSLQYLNLDSTSIEFFPQTEKTMHEPLEITMQNDRIKELPSSISNLMGLRKLYIQFKGLVPGGLPNDLFMLPEMVYLSIFDSPNVGESFKRFLIDKPGCYSPLRLLNCSACGLTDEDLHAILCCSPNLEELYVPWNEFVCLPTIIKESSKLRYLCVTRCKKLSEIPELPSSIKVLEAKECSILSSKASGLLWSQALKEAYRLQIIMPKITMIPIWFDHCYEGGVVSFWARQKFPVLAVAFILKEKASMGSANLYINGCNAHQFISNNYYCPYVKGEHVLLFDLRSLFKDDEEWRILDTFLIYEWNYVEVKYECDNLLLNDVVGMSNVSHCGAYVYKGQSNMEDIQFQCPYSTINPETPSHCSCATKSISVFSSPIVSPYPSKMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00763 673 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 520 IPR044974 GO:0006952
Aip09g00763 673 TIGRFAM eL43_euk_arch: ribosomal protein eL43 582 672 IPR002674 GO:0003735|GO:0005840|GO:0006412
Aip09g00763 673 Pfam Ribosomal L37ae protein family 585 669 IPR002674 GO:0003735|GO:0005840|GO:0006412
Aip09g00763 673 SUPERFAMILY Zn-binding ribosomal proteins 591 663 IPR011332 GO:0006412
Aip09g00763 673 SUPERFAMILY L domain-like 42 387 - -
Aip09g00763 673 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 585 653 IPR002674 GO:0003735|GO:0005840|GO:0006412
Aip09g00763 673 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 520 - -
Aip09g00763 673 Gene3D Ribonuclease Inhibitor 224 420 IPR032675 -
Aip09g00763 673 Gene3D Ribonuclease Inhibitor 44 223 IPR032675 -
Aip09g00763 673 Gene3D - 582 673 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00763 Aip-Chr9 9642715 9652359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00763 582 673 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 93.478 7.83e-58 188