Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00750 ATGGGAAGGGCTCCTTGTTGTGAGAAAGTGGGGTTGAAAAAGGGAAGGTGGACAGAAGAAGAGGATGAACTATTAACAAAGTATATTCAAGTCAACGGTGAAGGTTCATGGAGGTCATTGCCCAAAAATGCAGGATTATTAAGGTGTGGAAAGAGTTGCAGATTAAGATGGATTAATTATTTGAAAGCTGGGCTTAAGAGAGGCAACATTTCTTCTGAAGAGGAAGATCTCATTGTCAAGTTGCATACAACTTTTGGCAACAG 263 0.403 MGRAPCCEKVGLKKGRWTEEEDELLTKYIQVNGEGSWRSLPKNAGLLRCGKSCRLRWINYLKAGLKRGNISSEEEDLIVKLHTTFGN 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00750 87 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aip09g00750 87 CDD SANT 16 61 IPR001005 -
Aip09g00750 87 Gene3D - 11 67 - -
Aip09g00750 87 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aip09g00750 87 SUPERFAMILY Homeodomain-like 15 87 IPR009057 -
Aip09g00750 87 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aip09g00750 87 PANTHER TRANSCRIPTION FACTOR MYB111 2 87 - -
Aip09g00750 87 SMART sant 13 63 IPR001005 -
Aip09g00750 87 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00750 Aip-Chr9 9450037 9451867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00750 1 87 MYB Transcription Factor Family AT5G49330 81.609 1.36e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip09g00750 Myb_DNA-binding 5.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00750 K09422 - mnt:21385492 171.4