Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00748 ATGGGGAGAAGAAACGGGGGAAGGCCACTGCTCGGAACTCTCCGTCGTCGATTGGATTCGTGCAAGTCCCGCTACACCACCGTCGATGACATCGTTAACCACCTCCGCTCCACTTACCCCGATTACCAGCGCACCAAGCAGCAAGCCCTCACTCGATTAGTTCAACAAGTCCTCGAGCCACGTGCCAAACACGCGCCGCCCAAAGTCTCTCCCACGCGCGACGACGAAGACGATGACGAAGAAAGAGGTCGAAGCGCGCCCCGAAGGAGACGGAATACAATCGACCAAGGCGAAGAAAGGTTGCAGAAGATGGAGGCTTTGCACCTGCGTAAAAGGATGCAGGGAGAAGAGGAAGCTCAGGGTTCTGCTTCTACGTCCTCTGCTTCAAGCTCGAGCGCGTCCGGGAGCAGCGGCAGTGAGGAGGAGGAGGATGATGATGATGGCGCAGTATCTATGTCGACATCGGAGGACGCAATTTACGGGGAGAAGTACGAACCTGCTTTCGATTTGATGAAGACGATGCTGCGGAATAAGTACACTCCCAAAAAGGATGATAATGTGAGGAAGAAGAAGCCAGTTGTGGAGGATAAGAACGTTGAATTGGAGGTGGCCAATAGTAGCAAGGTTACTAACGAGCTTTGTGCTGTGAACGGAGGCAGAGGCGAAGCGAAAGCTGCTGCGAAGGATGTGAATTCAAAGGGTTCCGTTTCGAATGGCACCGGTGGTGGTGGCAGCGATGTTGAATTGAAACAGAAGACGGGACCGAGGTTCAGTGATTTGGGTGGAATGCAGGATGTTTTGGAGGAGCTGATGGAAGTGATTGTGCCATTGTATCATCCCGAGTTGCCAAGAGAGCTGGGTGTTACTCCTACTACTGGAATCTTGCTGCATGGGCCACCTGGTTGTGGCAAGACCACACTGGCTCACGCCATAGCTAATGAGACCGGTCTTCCCTTCTATCAGATATCAGCTACTGAATTGGTTTCAGGAGTCTCAGGTGCATCTGAAGAGAATATTAGAGAGCTTTTCACTAAAGCATATAGGACTGCCCCATCAATCGTCTTCATTGATGAGATTGATTCAATTGCTTCGAAAAGAGAGAATTTACAACGAGAGATGGAGAAGAGAATTGTAACACAGTTACTGGTTAGCATGGATCAATCAAGTAGGCGTATGGAATCTGCTAATGATTCGGACAGTTCTAAAGTTCATCCTGGCCATGTTCTTATAATTGGAGCAACAAATAGGCCTGATACTCTTGACCCGGCCTTGAGAAGGCCTGGGAGATCTACGCCAGGATACGTCAGTGCTGATTTGGTAGCTGTGGTTAAGGAGGCTGGTAATTTGGCAATAAAGAGAATCATTTCTGGAAGGAAATGGGAACTATCTCAGGATCATACAAGGTGTCTTGGAGACTGGTGGAAGGAACCTTGGTCGCATGAAGATGTGGATAAGCTTGTTTGCACAATGTCTGATTTTCAGGAAGCAGTGAAAAAGGTACAACCTTCATTAAGAAGAGAGGGCTTCTCATCCGTTCCCAATGTGAAATGGGAAGATGTTGGGGGCCTTGATTGTTTAAGGGAGGAGTTTGAATCCAGTATAATAAGGCCAATAAAATATCCCGAGGTTTATCAGACATTTGAGGTGGTAAATGAGACGGGAATTTTGCTTTTTGGGCCCCCTGGTTGCGGTAAAACTCTTATTGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTCATTCATATTAAGGGGCCTGAACTCTTAAATAAATTTGTTGGAGAAAGTGAGCGAGAAGTTCGACGAGTGTTTAGTCGTGCAAGGGCATGTTCACCCTGTATAGTATTTTTTGACGAGGTGGATGCTCTATCAACCAAACGGGATTCGGAAGGTGGATCGGTAGTCGAACGAGTAGTGAACCAGTTACTTATTGAGCTAAATGGTGGCGACCAGCGCCAAGGTGTTTTTGTTATTGGTGCTACAAATAGGCCCGATGTGATGGATGAGGCTCTCCTCCGTTCTGGTAGACTTGGTAAATTTCTTTACGTTCCTGTGCCGAACGCTGACCAGCGATTTTCAATATTGAAAGCTCTTGCAAGGAAGAAGCCTGCTGATTCTACTGTGGATTTGAGAGCCATAGCTGAAGCTTGTGAAAATTTTAGTGGCGCAGACCTTGCTGCATTGATGAATGAAGCAGCTAAAGCTGCTGTCAATGAGAAATTGACCTCAGTTGAAGCTACTAGTGATACTAATACATACATGCCAAGGCATTTCGAGATAGCACTTACTAAAGTCTCTCCCTCTGTGTCTCCCGCGGAAAGGCGTAGGTACGAGCGTTTGGCAGAGCGCTTTAAAGCATCATGA 2364 0.4767 MGRRNGGRPLLGTLRRRLDSCKSRYTTVDDIVNHLRSTYPDYQRTKQQALTRLVQQVLEPRAKHAPPKVSPTRDDEDDDEERGRSAPRRRRNTIDQGEERLQKMEALHLRKRMQGEEEAQGSASTSSASSSSASGSSGSEEEEDDDDGAVSMSTSEDAIYGEKYEPAFDLMKTMLRNKYTPKKDDNVRKKKPVVEDKNVELEVANSSKVTNELCAVNGGRGEAKAAAKDVNSKGSVSNGTGGGGSDVELKQKTGPRFSDLGGMQDVLEELMEVIVPLYHPELPRELGVTPTTGILLHGPPGCGKTTLAHAIANETGLPFYQISATELVSGVSGASEENIRELFTKAYRTAPSIVFIDEIDSIASKRENLQREMEKRIVTQLLVSMDQSSRRMESANDSDSSKVHPGHVLIIGATNRPDTLDPALRRPGRSTPGYVSADLVAVVKEAGNLAIKRIISGRKWELSQDHTRCLGDWWKEPWSHEDVDKLVCTMSDFQEAVKKVQPSLRREGFSSVPNVKWEDVGGLDCLREEFESSIIRPIKYPEVYQTFEVVNETGILLFGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKFVGESEREVRRVFSRARACSPCIVFFDEVDALSTKRDSEGGSVVERVVNQLLIELNGGDQRQGVFVIGATNRPDVMDEALLRSGRLGKFLYVPVPNADQRFSILKALARKKPADSTVDLRAIAEACENFSGADLAALMNEAAKAAVNEKLTSVEATSDTNTYMPRHFEIALTKVSPSVSPAERRRYERLAERFKAS 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00748 787 CDD AAA 554 684 - -
Aip09g00748 787 MobiDBLite consensus disorder prediction 57 99 - -
Aip09g00748 787 MobiDBLite consensus disorder prediction 225 255 - -
Aip09g00748 787 PANTHER AAA-FAMILY ATPASE 65 429 - -
Aip09g00748 787 PANTHER AAA-FAMILY ATPASE 429 783 - -
Aip09g00748 787 Gene3D - 686 763 - -
Aip09g00748 787 Gene3D - 244 434 IPR027417 -
Aip09g00748 787 MobiDBLite consensus disorder prediction 66 99 - -
Aip09g00748 787 Pfam ATPase family associated with various cellular activities (AAA) 555 684 IPR003959 GO:0005524|GO:0016887
Aip09g00748 787 Pfam ATPase family associated with various cellular activities (AAA) 294 430 IPR003959 GO:0005524|GO:0016887
Aip09g00748 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 513 783 IPR027417 -
Aip09g00748 787 Pfam AAA+ lid domain 708 746 IPR041569 -
Aip09g00748 787 ProSitePatterns AAA-protein family signature. 655 673 IPR003960 GO:0005524|GO:0016887
Aip09g00748 787 Gene3D - 513 778 IPR027417 -
Aip09g00748 787 MobiDBLite consensus disorder prediction 112 158 - -
Aip09g00748 787 ProSitePatterns AAA-protein family signature. 408 426 IPR003960 GO:0005524|GO:0016887
Aip09g00748 787 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 429 783 - -
Aip09g00748 787 Pfam Nucleolin binding domain 19 59 IPR031996 -
Aip09g00748 787 CDD AAA 293 429 - -
Aip09g00748 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 256 499 IPR027417 -
Aip09g00748 787 MobiDBLite consensus disorder prediction 118 137 - -
Aip09g00748 787 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 65 429 - -
Aip09g00748 787 SMART AAA_5 290 445 IPR003593 -
Aip09g00748 787 SMART AAA_5 551 687 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00748 Aip-Chr9 9407305 9411525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00748 251 785 Calmodulin-binding Proteins AT3G56690 34.740 1.80e-97 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00748 K14571 - gmx:100809594 897.501