Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00747 ATGGTTAGTGGTTTGTGTGCAATGGATAGGCCTCGTGAAGCCGAGGATTTGGTTGAAGATTTGAGAGGCAATGGTGGAGCGATTGACCCTTCAGCTTTTGAGTTGAAGTCCATTAGGTATGGTTATGGAAGGCTGGGGTTGTTCCATGATTTGCAGAGAGTTGTGGATCAAATGAATGCTGGAAACCTTGCAGCTGTTGTTCCTTCTATATTCAAAAATGGTGCTGGTTGTGGTGAGTGCTTTCAGATTAGATGCAAGGACCTAAAATTGTGCACAAAATCAGAAATCAGAGTGCTTCTAACTGATCTTAACAAAGATAATAAAACTGATTTTGTTCTTGACAGCAGAGTCTTTCAGTTTTTGGCTACCAAAAGAAAAGCTCAATATCTTCTTAAGCTTGGCGTTCTTGACATTGAATACAAAAGATATAAATAA 435 0.3931 MVSGLCAMDRPREAEDLVEDLRGNGGAIDPSAFELKSIRYGYGRLGLFHDLQRVVDQMNAGNLAAVVPSIFKNGAGCGECFQIRCKDLKLCTKSEIRVLLTDLNKDNKTDFVLDSRVFQFLATKRKAQYLLKLGVLDIEYKRYK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00747 144 PANTHER EXPANSIN-B3 57 142 - -
Aip09g00747 144 Pfam Lytic transglycolase 64 140 IPR009009 -
Aip09g00747 144 PANTHER EXPANSIN-LIKE A1-RELATED 57 142 - -
Aip09g00747 144 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 41 144 IPR007112 -
Aip09g00747 144 Gene3D - 39 143 IPR036908 -
Aip09g00747 144 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Aip09g00747 144 PRINTS Expansin/Lol pI family signature 133 144 IPR007118 GO:0005576
Aip09g00747 144 SUPERFAMILY Barwin-like endoglucanases 59 142 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00747 Aip-Chr9 9378955 9381130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00747 60 142 Expansin Gene Family AT3G45960 52.941 4.55e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00747 - - adu:107477263 135.191