Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00745 ATGCAGATGCGTTGGGATTATGATCCCACGGCGGTGGAGACGGCTATGTCCAATAAAAAAGGATGGCGACGGGATGCGAAGAAGAGGCCGTACAGCGGAACGAAAGACACAGTAATGGTCGGTGGGCGACGCCGCCAAAAACTGCATGGAGAAGGCACAGTTGTGCTTATGCAAAAGAATGTGTTAGACATTAATAGCCTAACTAGTGTTGAAGGGCTTCTTGACACAGGTTTGGGTGGTTTTACTTCAATAGTTGATACTGTTACTTCCTTCTTGGGTCGTTCAGTTGCTTTCCAGTTGATAAGTTCTGACAAAGTTGATTCTAGCGGGAAAGGAAAAGTTGGGAATACAGCTTATTTAAAAGGAGCCATTAACAATTTGCCAACTTTGGGAGACAAACAAAATGCATTCAAAATTGAATTCGATTATGATAGTAACGTTGGGATTCCGGGAGCATTTTACGTAAAGAACTATATGTCAAACGAGTTCTTGCTTGTTAGCTTGACTCTTGACGATATTCCAAATAATGTTGGAACCATCCACTTTGTTTGCAACTCCTGGATTTACAATGCCAAAAACTATCAATCTGATCGCATTTTCTTCGCCAACAATAATTATCTACCAAGCAAGACACCAAGTGCACTAGTGTACTACAGAGAATTGGAATTGAAGAATCTAAGAGGAGATGGAACTGGAGAACGAAAAGAATGGGAAAGAATTTATGATTATGATGTTTACAATGATTTGGGTGATCCAGACAAAGGTGTGGCATATGCTCGTCCAGTTCTTGGAGGATCTTCTACTTATCCTTACCCTAGGAGGGGTAGAACTGGCAGAAAACCAACAAACACAGATCCTAACAGTGAGAGTAGGAGCAGCAGTATATATATCCCAAGAGATGAAACTTTTGGTCACTTGAAATCTTCAGACTTCCTAGCTTATGGAATTAAATCAATATCCCAGGATGTAATCCCTGCTTTGAAATCAGTGTTTGACATAAATTTCACACCAAATGAGTTTGATAGCTTTGAAGATGTGTTTGATCTCTATGAGGGAGGAATTCACTTGCCTACTGATGTGTTTAAGGAAATTACTCCTTTGCCTGTTGTCAATGAACTTCTTAGAACTGACGGTGAAGAATTCCTCAAGTTCCCAGTGCCTAAAGTTGTTCAAGTGAGTAAATCAGCATGGATGACTGATGAAGAATTTGCTAGAGAGATTATTGCTGGACTTAATCCTGGTTTGATTCGTGTTCTGCAAGAGTTTCCACCAAAAAGTAAACTGGATAGTACAGTCTATGGTGATCATACTTGTATAATAACCAAAGAACAGTTAGAGCTTAACTTAGATGGACTCACAACAGATGAGGCTATCCAGGGCAAGAAATTGTTCATCTTGGATCACCATGATTCAATAATTCCATATCTAAGGAGAATAAACTCAACTCCCACAAAGGCCTATGCATCAAGGACCATTCTTTTCTTGAAAAATGATGGAACTTTGAAGCCATTGGCCATTGAGTTAAGTTTGCCACATCCTCAAGGAGATCAATATGGTGTTGTTAGCAATGTCTACTTGCCTGCAATTGAAGGTGTTGAGAGTGCTATTTGGTTACTTGCCAAGGCTTATGTTATTGTAAATGACTCATGCTTTCATCAGCTTGTCAGTCACTGGTTAAACACACATGCAGTAGTTGAACCATTCGTGATTGCAACAAATAGACAGCTAAGTGTGCTTCATCCTATTTATAAGCTTCTACATCCTCATTATCGCGACACCATGAATATAAATTCACTAGCAAGGTCATCCCTGGTCAACGCAGATGGTATTATAGAACAAACATTCTTGTGGGGAAGGTATGCTATGGAAATGTCCTCTGTTATTTACAAGGATTGGGTTTTTACAGACCAAGCATTGCCTGCGGATCTCATCAAAAGAGGAATGGCAGTGGAGGATCCAAGTTCCCCTCATGGTGTCCGTCTAATAGTAGAGGACTACCCTTATGCAGTTGATGGACTAGACATTTGGGACGCCATTAAAACATGGGTCCAAGAATATGTATCAATATACTATCCATCAAATGACACAATTCAGCAAGACTCTGAACTCCAATCTTGGTGGCATGAAATTGTCACTGTTGGCCATGGTGACAAAAAAGATGCTCCTTGGTGGCCAACAATGCAAACTCCTCAAGAACTCATACAAGTCTGCTCTACCCTAATATGGATCGCTTCGGCGCTTCATGCAGCTGTTAATTTCGGACAGTATCCTTACGGCGGTTTCATCTTGAACCGCCCCACCCTCAGTCGGCGGTTCATGCCGGAAAAAGGAACTCCGGAATATGATGAGCTTTCAACGAATGCTCAGAAGGCTTACCTGAGAACAATAACTCCCAAGTTTCAAACTCTGATTGATCTTTCTGTTATTGAAATCTTGTCCAGGCATGCTTCTGATGAGTACTATTTAGGGCAAAGAGATAGTGCTGACTTTTGGACAAATGATACAAAGGCACAAGAAGCATTCAAGAGGTTTGGAACAAATTTGGCTAATGTTGAATTGCAATTGGTTCAGAGGAACAACAATGAGACTTTGAGGAACAGAGTTGGGCCTGTTAGCATGCCTTACACTTTGCTTTATCCTTCAAGTGAAGAAGGCTTGACTTTCAGAGGAATCCCTAATAACCTCATATCAAAGTCTTGGTTACCTCCACAGCTTTGGAGGAAGCTCTTAACTGGAATCACTGAGCTGAAGAATTCAAGAAAGAAGAGGAAGAAGATGGGTAATCAGAAGCAAAAGTGGACGCAAGACGAAGAAGATGCACTCATCGCTGGCGTGGAAAAACACGGTCCagggaagtggaagaacattctcaaagaccctcaatttgcaccatttctcacttcacgttccaatatcgacctcaaggataaatggcggaatttgagtgttagcaatggcactcaagggtccaaggAAAAATCTAGGGTTCCTAGAATCAAGGCTGCGGCCCCTATTGCTGCTACCCCAGTTGCTGCTGCTGCTGCTAGTAATGCCATTGTTGTTGCCGGGGAAGATGCTACTATTGTCACCACTATGATTCATCAACCTGATCCTTCTGTTGCTGTGGGTGATTCTTCTCAAAATGACGAAGATGCCAAGAATCGTCCGAGGTACAATGCAATGGTTTTAGAAGCGCTATCAACTTTGAAAGATGCTAATGGATCTGACCTGAATGCGATTGTTAACTTCATTGAGCAAAAACACAAGGTTCCTCAGAATTTCAGAAGGGCATTGAGTACCAGGTTGAGGAGGCTTGTTAGTCAAGGGAAACTTGAAAAGGTACAAAACTGTTACAAGATTAAAAAGGACTATTCACCTGTGCCAAAATCACCAGTTGCTGTGAAAAAGAATGTGTGGCCACAACGGCAACAACCACCACCACCCCCCGAGTTTGTGGCATCTAATGAGACAATAAAGGAAGCTGCTGAAACTGCAGCCTACAGAATTGCCGAGGCTGAAAGCAAGTCATATTTAGCCGCTGAAGCAGTCAAGGAGGCAGAACGAATTGCACGCTTAGCTGAAGATGCTGAGGCGATGTTACAGCTAGTACAACAGATTTATGATGCTTGTTCGCGCGTGGAGATTGATGGGTTGGGTTGGAACCTTGGAGGTGATGCCATGGTTGTGTTTGTGGCTGTGGGCGGATTGGAGGACTGCTATCTATTAAGCTTACTTCGGTGA 3741 0.4076 MQMRWDYDPTAVETAMSNKKGWRRDAKKRPYSGTKDTVMVGGRRRQKLHGEGTVVLMQKNVLDINSLTSVEGLLDTGLGGFTSIVDTVTSFLGRSVAFQLISSDKVDSSGKGKVGNTAYLKGAINNLPTLGDKQNAFKIEFDYDSNVGIPGAFYVKNYMSNEFLLVSLTLDDIPNNVGTIHFVCNSWIYNAKNYQSDRIFFANNNYLPSKTPSALVYYRELELKNLRGDGTGERKEWERIYDYDVYNDLGDPDKGVAYARPVLGGSSTYPYPRRGRTGRKPTNTDPNSESRSSSIYIPRDETFGHLKSSDFLAYGIKSISQDVIPALKSVFDINFTPNEFDSFEDVFDLYEGGIHLPTDVFKEITPLPVVNELLRTDGEEFLKFPVPKVVQVSKSAWMTDEEFAREIIAGLNPGLIRVLQEFPPKSKLDSTVYGDHTCIITKEQLELNLDGLTTDEAIQGKKLFILDHHDSIIPYLRRINSTPTKAYASRTILFLKNDGTLKPLAIELSLPHPQGDQYGVVSNVYLPAIEGVESAIWLLAKAYVIVNDSCFHQLVSHWLNTHAVVEPFVIATNRQLSVLHPIYKLLHPHYRDTMNINSLARSSLVNADGIIEQTFLWGRYAMEMSSVIYKDWVFTDQALPADLIKRGMAVEDPSSPHGVRLIVEDYPYAVDGLDIWDAIKTWVQEYVSIYYPSNDTIQQDSELQSWWHEIVTVGHGDKKDAPWWPTMQTPQELIQVCSTLIWIASALHAAVNFGQYPYGGFILNRPTLSRRFMPEKGTPEYDELSTNAQKAYLRTITPKFQTLIDLSVIEILSRHASDEYYLGQRDSADFWTNDTKAQEAFKRFGTNLANVELQLVQRNNNETLRNRVGPVSMPYTLLYPSSEEGLTFRGIPNNLISKSWLPPQLWRKLLTGITELKNSRKKRKKMGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSNGTQGSKEKSRVPRIKAAAPIAATPVAAAAASNAIVVAGEDATIVTTMIHQPDPSVAVGDSSQNDEDAKNRPRYNAMVLEALSTLKDANGSDLNAIVNFIEQKHKVPQNFRRALSTRLRRLVSQGKLEKVQNCYKIKKDYSPVPKSPVAVKKNVWPQRQQPPPPPEFVASNETIKEAAETAAYRIAEAESKSYLAAEAVKEAERIARLAEDAEAMLQLVQQIYDACSRVEIDGLGWNLGGDAMVVFVAVGGLEDCYLLSLLR 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00745 1246 Coils Coil 1179 1199 - -
Aip09g00745 1246 Gene3D - 933 1007 - -
Aip09g00745 1246 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 205 897 IPR013819 GO:0016702|GO:0046872
Aip09g00745 1246 MobiDBLite consensus disorder prediction 267 294 - -
Aip09g00745 1246 Pfam Myb-like DNA-binding domain 930 981 IPR001005 -
Aip09g00745 1246 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE-3 50 895 - -
Aip09g00745 1246 Pfam linker histone H1 and H5 family 1056 1115 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aip09g00745 1246 Gene3D PLAT/LH2 domain 41 206 - -
Aip09g00745 1246 ProSiteProfiles Myb-like domain profile. 925 982 IPR001005 -
Aip09g00745 1246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 925 986 IPR017930 -
Aip09g00745 1246 SUPERFAMILY Lipoxigenase 207 894 IPR036226 -
Aip09g00745 1246 SUPERFAMILY Homeodomain-like 927 984 IPR009057 -
Aip09g00745 1246 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 1054 1122 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aip09g00745 1246 PANTHER LIPOXYGENASE 50 895 IPR000907 GO:0016702|GO:0046872
Aip09g00745 1246 SMART LH2_4 48 203 IPR001024 GO:0005515
Aip09g00745 1246 SUPERFAMILY "Winged helix" DNA-binding domain 1053 1131 IPR036390 -
Aip09g00745 1246 Gene3D - 307 395 IPR027433 -
Aip09g00745 1246 Gene3D - 530 897 - -
Aip09g00745 1246 ProSiteProfiles PLAT domain profile. 79 202 IPR001024 GO:0005515
Aip09g00745 1246 SMART h15plus2 1052 1117 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aip09g00745 1246 CDD H15 1055 1136 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aip09g00745 1246 ProSitePatterns Lipoxygenases iron-binding region signature 2. 579 589 IPR020834 GO:0016702|GO:0046872
Aip09g00745 1246 Gene3D - 207 306 - -
Aip09g00745 1246 CDD SANT_TRF 931 981 - -
Aip09g00745 1246 Pfam Lipoxygenase 215 880 IPR013819 GO:0016702|GO:0046872
Aip09g00745 1246 PRINTS Lipoxygenase signature 572 592 IPR013819 GO:0016702|GO:0046872
Aip09g00745 1246 PRINTS Lipoxygenase signature 534 551 IPR013819 GO:0016702|GO:0046872
Aip09g00745 1246 PRINTS Lipoxygenase signature 552 569 IPR013819 GO:0016702|GO:0046872
Aip09g00745 1246 CDD PLAT_LH2 52 203 IPR042057 -
Aip09g00745 1246 Gene3D - 396 529 - -
Aip09g00745 1246 Gene3D - 1050 1131 IPR036388 -
Aip09g00745 1246 Pfam PLAT/LH2 domain 104 201 IPR001024 GO:0005515
Aip09g00745 1246 SMART sant 929 984 IPR001005 -
Aip09g00745 1246 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 49 206 IPR036392 GO:0005515
Aip09g00745 1246 ProSitePatterns Lipoxygenases iron-binding region signature 1. 552 566 IPR020833 GO:0016702|GO:0046872
Aip09g00745 1246 PRINTS Plant lipoxygenase signature 270 289 IPR001246 GO:0016491
Aip09g00745 1246 PRINTS Plant lipoxygenase signature 337 358 IPR001246 GO:0016491
Aip09g00745 1246 PRINTS Plant lipoxygenase signature 421 440 IPR001246 GO:0016491
Aip09g00745 1246 PRINTS Plant lipoxygenase signature 809 823 IPR001246 GO:0016491
Aip09g00745 1246 PRINTS Plant lipoxygenase signature 172 190 IPR001246 GO:0016491
Aip09g00745 1246 PRINTS Plant lipoxygenase signature 198 219 IPR001246 GO:0016491
Aip09g00745 1246 PRINTS Plant lipoxygenase signature 237 253 IPR001246 GO:0016491
Aip09g00745 1246 PRINTS Plant lipoxygenase signature 487 511 IPR001246 GO:0016491
Aip09g00745 1246 PRINTS Plant lipoxygenase signature 382 398 IPR001246 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00745 Aip-Chr9 9310717 9328001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00745 31 895 Acyl Lipid Metabolism Gene Families AT1G55020 57.013 0.0 1044
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip09g00745 Lipoxygenase 0 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00745 K15718 - gmx:547869 1333.55