Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00733 ATGGAGAATTACGACGTGAAGTTTCTCTGCAGCTATGGCGATGAGATCCACCACCACCCCAACGACAAGAAGATCTCCTACGTCGGCGGCCTCAACAAGCTCCTCTACGTTAACCGTGGAATCGACTTCACCGCCATGCTCGCCGAACTCTCCGCCCTCTTTGACGCCACCGGTGACATCCACTTCAAGTATCAGCTCCCCGGCGATGACTTCGACTCTCTAATATCCGTCACCAGCGACAGCGGCCTAAACAGCCTGATGCTTGAGTATGATAACCTCTACAGAGATTCCCCTAAAACCGCTCGGATGAGATTATTCATCTTCTATGGTAAGGGTCCTGATTCCGCGTCCACCCAACCCTTCCCAGTCAAACTGAAATCCAAAGTCAACGGCGATGCTGTTGTTCCTCCGCAAATTACGCCGGTGAAGTTCCAAGATCTGCCACCGGTTAACAATTTTAATACCTCAGACCGAGCGTTGGATTCGGATCCAAAAGTGAATCAACCGGTCGAAGATTCCGGTTCTTCCCGTTTGAATAGTCCGTTACCTGCTTTACAGtatgataataacaagaaggcggaggttcagaagtggagggaagctctcactgcagcagcaaatttAGAAGGCTTGGACTCCCGTTCTTATGGGGACGAAATTGAATTCATTCAGAATATTGTCAAAGATGTTTTGCAGAAGCTGATTGACCATAACCCACCCAATGATAGTAAAAATCTTGTTGGCATTAGTGAAAATCTTGAAAATGTAAAATCACTATTAAGTGAATCTGTTGAAGTCAGAATGATTGGAATTTGTGGCATAGGGGGTATAGGAAAAACAACTCTAGCAAGACTTATATTTGAGAAATATTCTTATAAGTTTGAAGGCTCCTGCTTCTTAGAAAATGTACGGGAAAGATCAGGAAAGTATGGAAAATCCACTTTTGTTAAGCACAGGTTAAGCAAACAAAGAAATTTCATAGTTCTTGATGATGTGAGTAGTTTAAAGCAATTAAATTACCTGGTTGGGGAGCTTCAATGCTGTGGCGCAGGTAGTAAGATCATTATCACAGCTAGAGACAAAAATGTGCTGGTTCCAACGGTTGAAACAATATATGAGATGAAGATATTAGATTCTCATGAATCATTTAAACTGTTTAGTTTGAATGCATTCAATGAAGACTATCCACAAATTGGATACGAGGAGCTATCATGGAAAGCGGTTGGCTGTTGCAAAGGCAtcccactagccttaatagtattgggttcttttcttcattcaaagagtaaaactgaatggcatagtgcattgcaaaagcttgagaagacaccagatccagaaattcagaatattttaagattgagttatgatggattagatgatgaggcaaaacaaatttttctagacatcgcatgtttttttaagggagagcttgtagaatacgtagttaatctgttaggcagttgtggcttctatgcagctattggcatgagatcccttcttgatagagctttaatagctatatctcataattgtgtgcagatgcatgacttgatccaagaattaggttgggatatcgtttgtcaacaatctagtggaaatcctgaaaatcgtagccacttgtgggattctaatgatatttgggatgttttgggaaacaacaaaGGAACTGATTCTATTGAAAGCATAGTGTTGGATATGTCTCAAATAGAAGATCTACAGTTGAATGCTGATACATTCAAAAAGATGCCTAAGTTAAGATTTCTCAAATTATATATCCCATCGGAAAATGATGGCAGATTGAATAAATTGCATCTTCCCGTAGGACTAAAGCCATTTCCTTCTAAATTAAGATACTTGGAGTGGGATGCCTACCCTTTGCCATCTCTGCCATCGAATTTTTGTCCTGAGAAGCTTGTTACTCTTCGCATCCGGAACAGTAAACTTAAAAGACTTTGGGATGGGGTTCAGAATCTTGTTAATTTAGAGGAAGTAGATCTAACAGATTCCCGAAAGTTGGTGGAGCTTCCAGATTTCTCCAAGGCAGATAATCTCAAAAGTGTACATCTGTCTGGCTGTCGAAGTTTGCGTCATGTCCATCCATCTCTTTTATCACTTGGAAAACTTGAACTTTTAGATCTTTTGAACTGTGCAAAACTTGAGATGCTTGAAACTAAGATGCATTCAAAATCTCTTAATCACCTCTATATCAAGAGCCGCACAAGTTTAATCCCACCCTATGTCAGTCACTTATCATCTTTACGGAAATTACTTCTAGATGGAAGCCCTGTGGAGACATTGCCGGTGAGCATCAAACACCTTACGGAGCTGAAAACACTGTCACTAAAAGGGTGTAAGATGCTTCAACATTTGCCAGAGCTTCCATCATCCATTCGTCATTTGACTGCTCTGGACTGCATAATGCTGCAAACTGTGACATTCAGTTCAAATATTCCTAGACTACAAGAAGAAAAACGCATAAACATCTCGTTCCATAATTGCATGAAGTTGGATGTGGCGAATTGTATTTATTGGTACCTTAAAGATATAAGGAAACTTGCTTACGTGTGTGAATCCAGAAGAGGAGGAAAAGGAGTAGTTCGGAGAAGTGATTTCTTCAAGATTTGTTACCCCGACTACAGAGTACCAGAGTGGTTCATGCATCGGACAAAGGGTACTTCCATAACTTTTGAAGTTTCTTCACCTTCCAGTTATGGTTTTAGTTCCCTTCTCTGCGTTGTTCTCCCTAAGTATAGTTTGGATTATGAACTTGATATTAAATGCCGTTGCTACTTGGAAGATGGTAGTAACATGCACAAATATTCATTTGGCGTATTATTTCTAAATCACATTCCGGCAAAAGGGTGTTCTGATCATGTTTATATGGCATATAATTATGGAGGCATCTTTGATGTAATCAAGCTGGACAGATTGAATAATAAGATTGCGTCTTCCGGGCAAAACCCAAAAGTCACATTTGAATTCTTTGTCAGCAGTGGCGATACTGGAAGTAAACAAGATGATAACTTGTTGATCAAAGACACATGGAACCATGAGGTTGGAGTTGGAAGCTCCCGGGCCCCAGCTAAAACTCGTATTTGCTCTTGGCTTTATCTAGAAGTGCACGCCACCGCACAATGGTGGTGGCAGGCGGTGGCAATGGTGTGTGGATAG 3174 0.351 MENYDVKFLCSYGDEIHHHPNDKKISYVGGLNKLLYVNRGIDFTAMLAELSALFDATGDIHFKYQLPGDDFDSLISVTSDSGLNSLMLEYDNLYRDSPKTARMRLFIFYGKGPDSASTQPFPVKLKSKVNGDAVVPPQITPVKFQDLPPVNNFNTSDRALDSDPKVNQPVEDSGSSRLNSPLPALQYDNNKKAEVQKWREALTAAANLEGLDSRSYGDEIEFIQNIVKDVLQKLIDHNPPNDSKNLVGISENLENVKSLLSESVEVRMIGICGIGGIGKTTLARLIFEKYSYKFEGSCFLENVRERSGKYGKSTFVKHRLSKQRNFIVLDDVSSLKQLNYLVGELQCCGAGSKIIITARDKNVLVPTVETIYEMKILDSHESFKLFSLNAFNEDYPQIGYEELSWKAVGCCKGIPLALIVLGSFLHSKSKTEWHSALQKLEKTPDPEIQNILRLSYDGLDDEAKQIFLDIACFFKGELVEYVVNLLGSCGFYAAIGMRSLLDRALIAISHNCVQMHDLIQELGWDIVCQQSSGNPENRSHLWDSNDIWDVLGNNKGTDSIESIVLDMSQIEDLQLNADTFKKMPKLRFLKLYIPSENDGRLNKLHLPVGLKPFPSKLRYLEWDAYPLPSLPSNFCPEKLVTLRIRNSKLKRLWDGVQNLVNLEEVDLTDSRKLVELPDFSKADNLKSVHLSGCRSLRHVHPSLLSLGKLELLDLLNCAKLEMLETKMHSKSLNHLYIKSRTSLIPPYVSHLSSLRKLLLDGSPVETLPVSIKHLTELKTLSLKGCKMLQHLPELPSSIRHLTALDCIMLQTVTFSSNIPRLQEEKRINISFHNCMKLDVANCIYWYLKDIRKLAYVCESRRGGKGVVRRSDFFKICYPDYRVPEWFMHRTKGTSITFEVSSPSSYGFSSLLCVVLPKYSLDYELDIKCRCYLEDGSNMHKYSFGVLFLNHIPAKGCSDHVYMAYNYGGIFDVIKLDRLNNKIASSGQNPKVTFEFFVSSGDTGSKQDDNLLIKDTWNHEVGVGSSRAPAKTRICSWLYLEVHATAQWWWQAVAMVCG 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00733 1057 Gene3D - 172 233 IPR035897 -
Aip09g00733 1057 CDD PB1_UP2 9 108 - -
Aip09g00733 1057 MobiDBLite consensus disorder prediction 145 184 - -
Aip09g00733 1057 Gene3D - 234 312 IPR027417 -
Aip09g00733 1057 PRINTS Disease resistance protein signature 268 283 - -
Aip09g00733 1057 PRINTS Disease resistance protein signature 772 788 - -
Aip09g00733 1057 PRINTS Disease resistance protein signature 411 425 - -
Aip09g00733 1057 SUPERFAMILY CAD & PB1 domains 22 117 - -
Aip09g00733 1057 SUPERFAMILY L domain-like 514 849 - -
Aip09g00733 1057 Gene3D Ribonuclease Inhibitor 732 854 IPR032675 -
Aip09g00733 1057 Pfam PB1 domain 21 108 IPR000270 GO:0005515
Aip09g00733 1057 Gene3D - 376 460 IPR042197 -
Aip09g00733 1057 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 207 790 - -
Aip09g00733 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 470 IPR027417 -
Aip09g00733 1057 Pfam NB-ARC domain 317 451 IPR002182 GO:0043531
Aip09g00733 1057 Gene3D Ribonuclease Inhibitor 546 731 IPR032675 -
Aip09g00733 1057 Gene3D - 313 370 IPR027417 -
Aip09g00733 1057 Pfam Leucine Rich Repeat 638 657 IPR011713 -
Aip09g00733 1057 SMART PB1_new 20 108 IPR000270 GO:0005515
Aip09g00733 1057 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 207 790 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00733 Aip-Chr9 9036420 9041928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00733 194 809 WRKY Transcription Factor Family AT4G12020 34.245 7.42e-89 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00733 - - adu:107464414 1580.07