Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00727 ATGTCCAGAAATGAGGATGATGTTAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCAAATGCAGAAGATGATGTTGAAGACGATTATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAACAAGATTGTGGTGTAAAAAGAATAGCAGATTTAATGGTGGACGATATTTGGAACCTGGAGTTTAGGATAGAGGATGAGGCTTGCCAATTTTATAACGCTTATGCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTAGTTAGGGATAATCAAGTTATAATCATTAGCAGGCAACTTGTTTGCAATAAGGAGGGCTGGAAGAATATGAGGTATCTTGATTTGGATGATAGATCAAGGGAGGTAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGGTTTGTGGAATCTCACAACCACGATCTGACGGCCCCCAATTTGCGCATCTGGTTCCGGCCAATCGTCGTCTCACTATTACTGATAAAGTCCAAGTAG 558 0.4211 MSRNEDDVKNDSDNDLGDDFDYQPNAEDDVEDDYVDSLDSTSKSEQDCGVKRIADLMVDDIWNLEFRIEDEACQFYNAYACWHGFVMRKDDVVRDNQVIIISRQLVCNKEGWKNMRYLDLDDRSREVRSLTRTKCPARLRVKLDYGCGRWKVSWFVESHNHDLTAPNLRIWFRPIVVSLLLIKSK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00727 185 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Aip09g00727 185 MobiDBLite consensus disorder prediction 11 35 - -
Aip09g00727 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 166 - -
Aip09g00727 185 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00727 Aip-Chr9 8899230 8899787 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g00727 FAR1 5.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00727 - - adu:107460934 301.212