Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00713 ATGTCTTGCTCAACCAAgaaatatgatgtttttcttagcttcagaggcgaggacacacgcacaaacttcactagccatctttacactgctcttgatcaaaagtcaatcagaacttacatagattatcaactcaacagaggagaagatgtttggccaccactcgccaaagcgatcgagaactcgcatgtatcggttgtggttttctcagagaactatgcttcttcaaaatggtgcttggaagaacttgtcaagattctccaatgcagaaaggattttggccaggttgttattccagtgttctatgaaacagatccatcacatataagaaaacaaagtgggagttatgggaaggcatttgcaaaacatgagcttgatctttgggtagagggcagatacagtgattccaacaaacacaaagtagacaattggaaagctgctctcactgaagctgccaatatttctgggtgggaCTCTCGGAACCACAAGGACGATTCTCAACTGATTGCAAACGTGGTTAATGATGTACTGCAAAAGCGTTACTTGAGGCACCCTATTGAACTAAAAGGCCTTGTTGGAACTGAAGAAATCTGCAGAAATGTCGAATTGTTAATGAAAAGAGTTCGAATAATTGGAATTTGGGGCATGGGTGGAATAGGTAAGACAACCATTGCCAAAGTGTTGTTTGCCAAACTGTTTCCTCAGTATGACAATGTGTGCTTTGTGGTGAAAGAAATCTCAGTTGATAGGCTTCTGTTCGAGCTGTTAAAGGAAGAAACTTCCACATCTAACTTGGTAGGACTCGCATTCGACATGAAGAGGCTTAATAACAAAAAGGTCCTCATTGTGCTAGATGATGTGGATAGTCTTGATCAATTGGAACATTTGTGTAGAGATTTTCGAGATCTAAGTGAAGATAGTCGACTCATCATAACTACAAGAAATAGGCAATTGCTTGCTGGAAGAGTTGATTGGATATATAAGGTTGAGAAATGGAAAGCATCTGAATCTCTACAGCTTTTTAGCCTGGAAGCCTTCAAGGAAACTCATCCTCAAAGGGGTTATGAAGATCTCGCCGCAATGGCGGTTAAGtatgctggaggcattcccttagctttgaaagttttgggttcgtatcttcgttcgaaaagtatcaaattttgggaaagtactttgagaaaactcaacaagtatcccaatgagacgattgtaaatttgttgaaggtaagctatgatggattggatgatctagagaagaagatattcttggacattgcattttttttcAATGGAGAAGAGAAAGATCATGTCATAAGCATACTAGATGCATGTGGATTTGAAGCAAGTAGTGGAATAGATGTTCTTGAAGATAAAGCTTTGATAACCATTTCATATAACAACACAATAGAAATGCATGAACTGCTACAAAAAATGGGTTTTGACATAGTGCGTAGAGAATGTAGTGGAGACTTTGCAAGACGAAGTCGATTGAGGGATACTGAAGTTCGTGCTGTACTTAAAGATAATAAGGGGACTGATGCAGTTGAAGGCATAATATTAGATTTATCTCTAATCAAAGATATTCATTTGAGTGTTGACACATTCAAAAAGATGAATAACATGAGATTTCTAAGATTCTATATCCCCTTGGGTCAGAGTCCTGGCCATGTGTACCTTCCAAGAGCTCTTAAGTCATTTTCCAATAAACTGAGGTACTTTGAGTGGAATGGATATCCTTTGGAGTCTCTTCCTTCAACTTTTCATGCTAAGTTGCTCGTTGAAATTCGCATGCCGCACAGTCGTGTCGAACAACTTTGGAGGGGAAAACAGGAACTTGATAATTTAGAGGGCATTGACCTAAGTGATTGCAAACATTTGATAATGCTTCCGGATTTGTCGAAGGCGTCAAGACTTAAATGGGTGAATCTATCAGGTTGTGAGAGTTTGTGTGCTCTTCATTCATCTATTTTGTCCTCTGATACACTTGCCACTTTGATACTAGATAGGTGTACAAATCTGGGGACTGTGAAAGGTGAAAAGCATTTAAAATCTCTGAAGAATATTAGTGTCAGTGGGTGCTCAAGTCTCAAGGAATTTGCAGTGTCATCTGATTTAATTGAGAACTTGGATTTAAGCAACACAGAAATTGAGACGCTAGACACATCAATTGGGAATCTACCTAATCTTATATGGCTCAATTTAGAAGGTTTGAAGCTTAAGCAACTTCAAAAGGAGTTATGTTTCTTGACATCACTAAAGGAGTTAAAGCTTTCTTACAGTGGACTAGTAATTGACAAGCAGCAACTGCATGTGCTGTTTGATGGCTTGAGATCTCTACAGATACTCCATCTGAAGGATTGTGCTAATTTGTTTGAATTTCCCGACAACATTGGCACTTTATTGAAACTACAAGAGTTAAAGCTAGATGGAAGCAGTGTGAGGAGTTTGCCTACAAGCATCAAACATCTTTTAGTGCTCGAGATTCTGTCATTAAAGAATTGCAGGGAGCTTCTGAGCCTACCGGAGCTTCCGTCTTTCATCAAGGAATTCTATGCCCCTAACTGCACCTCATTGGAGACAGTATCAAAATTCAAAAGCTTTGCGATGAAGATGGTGGGAAAGACAAAACACATTTCATTCAAGAATAGCATGAAACTGAATGGAAACTCACTGTATTCTATCATGGAAAGCTTGCATTTAACAATGTTAAGTGCTGCATTTCACAATGTGTTGGTAAGAAGATTCCATGTGGCCATCCATAGTTATAATTATAACTGTGTGGATGCCTGTTTACCAGGAAGCAGAGTCCCCGAGCAATTCACATTTCGAATAACAAACTCTTCCTCCATTACCGTTCATCTTCCTACCTGTTCCAACTTGCTGGGCTTCATCTACTGTGTGGTTCTCTCACCATCCAATGGAATGAAGCAGTGCGGTGCAAAAATACAGTGTGAATGCAATTTGGCAGGAGGCCTAAAGGCTACATGGCAAGATAAAGCAGTTAGTGAGCTGAACTCGGATCATGTTTATTTATTGTATGATCCATTCCATTGTGACAACATTCTCAGATTTTATGAACCAAAGGTCTATTTTGAGTTCAGTGTAACAGCTGACACAGGGGAAGTTGATGGATCTATAGCTATTCAAGAGTGTGGTGTACACCTCATAAGTGATTCAGAATTGCAGTGTGTTTTATCAGAACTGGAAATGGATTTAGACAAGAGGAAGGACTTGGAGAAGGAATTGGAGATAGAATCTGGAAAGGCCAGATGGTTATATACACATGCCTCCGAAGATCACAGCAAAAATCTGATTGTTGAAATAGATCCTAGGAGTACAGACCATTTTTCTGATGTAGAAGAGAGAATGGAATCTAATTGCAAGAAAATCAAGAATGGTGATAGAAAAGGTCTTGAGGAAAATAACTCAAAGTCAACAAAAGCTGTCAAAAGCAAAGGAAATGAAGGCAGGCCAATTGATTTTGATGCTGGATTGGATCTGCTTGTTAATTCAGATTCAGCCAGTGAAGAATATGCGCCTGAAGACATGCCACTTCAAAACTTTTATGATCAACCAAATACCATAGAAGGATCTAATCACTATAAAGAAAATCCAATGCTACTAAAAAGACAACTCCTGGTTCATCCTGACATTAATGATCTGACCGTTGAAAAACCAAACCAGGAAAGAAAAAAGGAAAGAATGGGTCTCGACAAGCCTAAAGTGGAAGGTGAGTCGGATGAAGATCCTCTTGCTGAACTTGAGAGCATCTTGCTGGGAAGACAGAAGTCGTTGCTGAAACCAGCCTGTTCTGCAAGCGATGTTGCCATAAGGGAAGCTTTGCAAAATCTTGAATGCATACTCGAAAAGTCACTTGAAAACATTCTTGGTGACATTGAATTACAACACAAGTTACAAATTTCTTTGCAATGCATAGAAGAGGCATCAGATGAAGAAGTTTCTCCCAGTATAACAAAGCTTGTCAAAAGCATGACATCTTCTGTTGAGGATCTGATCAAAAGTTTTGCGTGGACCCAAAAAGTAGTTGAAGACCACACTAGCCGCTTGGAACAAAAAGAAAAACTTGTGCAGAAAATGTTAGATGCTAGGAAACAGCAAGAATTAGTGAAAGAAAGAATGAAACAATACAAGATTCAAGCAGAAAGTGTTGAGAGAGAGGTTGAAGATCTTGACGAACAAATTCGATTTCTTGTTGGACAAAGAAAAATCATCCAAATGAAAAGGACCAAGTTGAATAAGGACTTGGAAGAATGCGATGGCAAAAGGAGGAAACTAACAGATGAGGCTAAGGATTGGGTAACTGAAAGCAAGGAGCTAATGTTGACAATTAACAATTCTGAAGCCTCATATGCAAGTGCAATATCTAAGCAAGAGAAGTTGAATGAGAAATGGGAAGGTTTTCGAGAATCTTTTTCACAAAAGAAGTTAAAACCTTATCCTAGAATAGTGCTGTAG 4473 0.3338 MSCSTKKYDVFLSFRGEDTRTNFTSHLYTALDQKSIRTYIDYQLNRGEDVWPPLAKAIENSHVSVVVFSENYASSKWCLEELVKILQCRKDFGQVVIPVFYETDPSHIRKQSGSYGKAFAKHELDLWVEGRYSDSNKHKVDNWKAALTEAANISGWDSRNHKDDSQLIANVVNDVLQKRYLRHPIELKGLVGTEEICRNVELLMKRVRIIGIWGMGGIGKTTIAKVLFAKLFPQYDNVCFVVKEISVDRLLFELLKEETSTSNLVGLAFDMKRLNNKKVLIVLDDVDSLDQLEHLCRDFRDLSEDSRLIITTRNRQLLAGRVDWIYKVEKWKASESLQLFSLEAFKETHPQRGYEDLAAMAVKYAGGIPLALKVLGSYLRSKSIKFWESTLRKLNKYPNETIVNLLKVSYDGLDDLEKKIFLDIAFFFNGEEKDHVISILDACGFEASSGIDVLEDKALITISYNNTIEMHELLQKMGFDIVRRECSGDFARRSRLRDTEVRAVLKDNKGTDAVEGIILDLSLIKDIHLSVDTFKKMNNMRFLRFYIPLGQSPGHVYLPRALKSFSNKLRYFEWNGYPLESLPSTFHAKLLVEIRMPHSRVEQLWRGKQELDNLEGIDLSDCKHLIMLPDLSKASRLKWVNLSGCESLCALHSSILSSDTLATLILDRCTNLGTVKGEKHLKSLKNISVSGCSSLKEFAVSSDLIENLDLSNTEIETLDTSIGNLPNLIWLNLEGLKLKQLQKELCFLTSLKELKLSYSGLVIDKQQLHVLFDGLRSLQILHLKDCANLFEFPDNIGTLLKLQELKLDGSSVRSLPTSIKHLLVLEILSLKNCRELLSLPELPSFIKEFYAPNCTSLETVSKFKSFAMKMVGKTKHISFKNSMKLNGNSLYSIMESLHLTMLSAAFHNVLVRRFHVAIHSYNYNCVDACLPGSRVPEQFTFRITNSSSITVHLPTCSNLLGFIYCVVLSPSNGMKQCGAKIQCECNLAGGLKATWQDKAVSELNSDHVYLLYDPFHCDNILRFYEPKVYFEFSVTADTGEVDGSIAIQECGVHLISDSELQCVLSELEMDLDKRKDLEKELEIESGKARWLYTHASEDHSKNLIVEIDPRSTDHFSDVEERMESNCKKIKNGDRKGLEENNSKSTKAVKSKGNEGRPIDFDAGLDLLVNSDSASEEYAPEDMPLQNFYDQPNTIEGSNHYKENPMLLKRQLLVHPDINDLTVEKPNQERKKERMGLDKPKVEGESDEDPLAELESILLGRQKSLLKPACSASDVAIREALQNLECILEKSLENILGDIELQHKLQISLQCIEEASDEEVSPSITKLVKSMTSSVEDLIKSFAWTQKVVEDHTSRLEQKEKLVQKMLDARKQQELVKERMKQYKIQAESVEREVEDLDEQIRFLVGQRKIIQMKRTKLNKDLEECDGKRRKLTDEAKDWVTESKELMLTINNSEASYASAISKQEKLNEKWEGFRESFSQKKLKPYPRIVL 1490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00713 1490 Coils Coil 1348 1368 - -
Aip09g00713 1490 MobiDBLite consensus disorder prediction 1224 1246 - -
Aip09g00713 1490 MobiDBLite consensus disorder prediction 1131 1155 - -
Aip09g00713 1490 Pfam NB-ARC domain 205 400 IPR002182 GO:0043531
Aip09g00713 1490 Gene3D - 332 414 IPR042197 -
Aip09g00713 1490 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 943 IPR044974 GO:0006952
Aip09g00713 1490 SUPERFAMILY L domain-like 519 859 - -
Aip09g00713 1490 ProSiteProfiles TIR domain profile. 6 179 IPR000157 GO:0007165
Aip09g00713 1490 Gene3D Ribonuclease Inhibitor 704 898 IPR032675 -
Aip09g00713 1490 Gene3D Ribonuclease Inhibitor 505 703 IPR032675 -
Aip09g00713 1490 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Aip09g00713 1490 Pfam C-JID domain 930 1059 IPR045344 -
Aip09g00713 1490 Gene3D - 4 175 IPR035897 -
Aip09g00713 1490 PRINTS Disease resistance protein signature 609 625 - -
Aip09g00713 1490 PRINTS Disease resistance protein signature 209 224 - -
Aip09g00713 1490 PRINTS Disease resistance protein signature 273 287 - -
Aip09g00713 1490 PRINTS Disease resistance protein signature 365 379 - -
Aip09g00713 1490 Coils Coil 1372 1406 - -
Aip09g00713 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 424 IPR027417 -
Aip09g00713 1490 PANTHER NB-ARC DOMAIN PROTEIN 6 943 - -
Aip09g00713 1490 SUPERFAMILY "Winged helix" DNA-binding domain 401 486 IPR036390 -
Aip09g00713 1490 Pfam TIR domain 7 179 IPR000157 GO:0007165
Aip09g00713 1490 SMART till_3 7 153 IPR000157 GO:0007165
Aip09g00713 1490 Coils Coil 1064 1084 - -
Aip09g00713 1490 Gene3D - 176 322 IPR027417 -
Aip09g00713 1490 MobiDBLite consensus disorder prediction 1224 1248 - -
Aip09g00713 1490 Coils Coil 1414 1434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00713 Aip-Chr9 8640302 8646773 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00713 775 870 WRKY Transcription Factor Family AT4G12020 31.250 1.41e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00713 - - cam:101515491 1525.76