Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00712 ATGGAGAACTACAAGGCAAAATTCATGTGCAGCTACGGCGGCAAGATTCAACGCGACACACTCGACCACACTAAGCTCTCCTACGTCGGCGGCCACACCAAGATCGTCTACGTCCACCGCACCACCATAACCTTCCCCGCAATGCTCGCCAAGCTTGCCACCCTCTGCAATGCCGCCTCCGCCTCCGCCGACGTCTCCTTCAAGTACCAGCTTCCCGGCGAGGATCTCGACTCCCTTATCTCCGTCACCGACGATGACGACCTCGAAAACATGATGATCGAGTACGATCAACTCCACAGCGCTTCCCCTAAAACTGCTCGCATGCGACTCTTCCTCTTCCCCAACCTCCCTCTTGATTCTGCTGCCGCTTCATCTGAACCCGAACCCGACCCGGCCGTAAGGCAGTTACAGCTTCCTCCTCCTCCACCTCCTCCTTCTTCTTCATTATCTTCCCGTTTGGTTGGTCCGTTGAGTACTCAtggaaagtacgatgtgtttatcagttttaggggtgaggacacgcgcaccaacttcacctgtcatcttcacgaagctctgtgcagaaagcgaataaagaccttcatcgattacgagcttcacaaaggcgatgagatctcgccgtcgctctttcgcgcaatcgaggattcgtatgtgtctgttatcgtcttctcggagaactatgctgactccaagtggtgccttgaagaactcgtgaggatattggagtgtagaaaagaatatggacaggttgttatacctgtgttctatgagattgatccatcacatgtaaggaagcagaatggaagttacaaagaagcgtttgagaagaagcacatgcaaaattccatgcttgatataaacaagattcaaaaatggaaggatgctctggctgaagcagctgatttggctggctgggatTCTCACTCCCGCTCCTATAGGGATGACACTGAACTCATTCAAAGGATTGTCAAAGACGTTTTGCAAAAGCTAATTTACCATTACCCACCCAATGATTTTAAAGGCCTTGTTGGTATTCAGGAAAAGTCTGCCCCTTTAGAATCATTACTAAGAGAAGCTCGATCGGTTGGTATATGGGGGATAGGTGGGATAGGCAAAACAACTATTGCGAGATATATATTTGACAAATACTCTCATGGGTTCGAAGGTTCATGCTTCTTGGAAAATATACGGGAAAGATCAGGAGATCATGTGCAAGGACTACATGATTTACGCGATCAACTTTACTCAGTGCTGTTAAATGAAAAAGTTCGCCAAAGTAGCACAGCAAAATCAACTTTTGTTGAGTGCAGGATCCGCAGACAAAGCAATTTCATAGTTCTTGATGATGTGAGTAGTTCGAAGCAGTTGAAATACCTTGTTGGGGAGCTTGAATCCTATGGTCCAGGTAGTAAGATCATCATTACAACTAGAGATAAAAGTGTGCTGCAAAACAGGAGAGTTGAGAAAATACATGAGGTGGCGGGGTTAGATTCCCCTGCATCCCTTACATTGTTCAGCTTGAATGCATTTAATGAAGACTCTCCGGAAGTGGGATATAAAGAGCTATCAAGAAAGGCAGTTAACTATTGCAAAGGTGtccccctagccttagtagtgttgggttctttccttcattctaaaactgaagctgaatgggaaagtgcgctgaacaaaatcgagaagattcccaatgaagaaattcaaactgtgctaaggttgagctatgatgagttagattatgaggagcaacaaatatttctagacattgcgtgttttcttaagggtgaactaaaagaaaacatagttagtctgttagacagttgcagcctctacccagttattggcatgagatcccttcttgataaggctctcataactatatctaatgattctgtagggatgcatgacttgatacaacaaatgggttgggagatcgttcgtcaagaatcTATTGAAAATCCTGAAGATCGTAGTCGACTGTGGGATCTTGATGATACTTGTGATGTTCTCAAAAACAATAAGGGAACTGGTGCAATTCAAGGCATGAAGTTAGATACATATCAAATTCGACAAAACCTAAGCTTGAGTGTTGACACTTTCAAAAAGATGCCTAATCTAAAATATCTCAAATTCTTTATCTCCATAAGGGAGCATGGCAAATTATCTGGTCTGCAGCTTCCTGAGGAGTTGGAGTCTTTTTCTGAGAAATTAAGGCACCTTGAGTGGCATGCATATCCTTTGCCTTCTCTACCATCAAATTTTTGTCCTGAAAAGCTTGTCACTCTTCAAATGCCTAATGGTCAATTTAGAAGACTCTGGAACAAAATGCAGGATCTTGTTAATCTGAAGGATGTAAACCTAGCTGGATGCCAAGAATTGGTGGAGCTCCCTGATCTGTCTAAGGCAAAAAATCTTAGAAATGTGGATCTCTTTGGCTGTAGAAGTTTAAGCAACATCCATCCATCCATTTTATCTTGCAGCACACTTGAGCGTTTGGATCTAACTGGCTGCTCAAAGCTTGAGACGCTTGAAAGCCAGACTCATTTTAAATCACTTTGGCACCTCAACGTCAGTGGCTGCAAAAGTCTAGCTAAATTTTCTGTGTCTTCAGAAGAAGTTGAAGTCTTGGATTTAATGATGGGAGTCAAAGTGTTACACCCATCCATTGGGCGTTTCAGCAAAGCAAGAATCTTACATGTCGATGGCCATCGACTTGAGAATCTTCCGAAGGAATTGTCTTGTTTGAAATCTCTCGAGACGCTTTCGCTGCATAGATGCAGCCGAGTAAGCTCCAAAGAAAACCTGCATCTCGTATTTAATGGCTTGCAATCATTGCGTGAACTGTATTTTATGGATTGCCATTACTTGTTTGAGCTCCCCGACAATATCAACCAGCTATCGTCGCTACAAAAGTTAGCTTTGGATGGAAGCTATGTGGTGAGGTTGCCGGAGACCATCAAGCATCTTTCAGCACTGGAAACATTGTCATTAAAGGGTTGCAGGAGGCTTCAATCTTTGCCAGAGCTTCCATCATCCATTATTCGTTTGGAAGCAGACAACTGCACATTGTTGCCCATAGCATCATCAAGTTTAACAAATTTTAGGCCGAAAGAAGATGGCAGAAGTGATGATTCATTTCATAATTGTGTGAATTTCCATGTACAGAAACATACTGATTCATTCCATCAATATTTAAGGGACTTAGCGCACCGATATGAGTTAAGAAGGATTAAAAGAAGAGGAGGGGGAGGACGAAGAACAATGTTTGCAGATATCAATTTCAGAATCTTCTACCAAGACCACAGAATACCAAAGTGGTTCACGTATCAAACAAAGGGAGCTTCCATAACTTTTGAACTTGATCAGCCTTATGATCTCTGTTCTAGTTTCGTTCTCTGCGTTGTTATCGCACCCTGTTGGCCTTCCCCAATCAAATATGGCCTTATTCTTCAGTATCAATGCCACCTGGAAGATAGTGACATGAACAAATATTCAACTAGTAAAATTCTTCTTGATGACGTTCCTGCAGAACGGGATTTTGATCATATTTATATGTCATTTGACCGTGGTGGCATCATAGAGGCAATTAAGGCATACAAATTAAAATACGGAAGTCAGAGCGAGTCTTACAAGGGCAACCTAAAGGTCACAATTGAATTCTATTTCTATTGTTGCACATTTCAGTGGAGTCAGGATCATGATTGGTTGATCAGAGAGTGTGCGGTTTATCCACTTGTTGCCCCTGATTCTCAGTTGAAGCAGGTGGAATTGAAATTGGAGTTGGGCATGGAAAATAAAAGGCCTAGGGGTATTCTTGAGATGGAGCATACTGAAGGTGGGGTTGGAGTTGGAAGCTCCAGTGACCGAGGACCACTCCCTTCCACAAAGAAATTCAAAGAACTATGCTAG 3909 0.3451 MENYKAKFMCSYGGKIQRDTLDHTKLSYVGGHTKIVYVHRTTITFPAMLAKLATLCNAASASADVSFKYQLPGEDLDSLISVTDDDDLENMMIEYDQLHSASPKTARMRLFLFPNLPLDSAAASSEPEPDPAVRQLQLPPPPPPPSSSLSSRLVGPLSTHGKYDVFISFRGEDTRTNFTCHLHEALCRKRIKTFIDYELHKGDEISPSLFRAIEDSYVSVIVFSENYADSKWCLEELVRILECRKEYGQVVIPVFYEIDPSHVRKQNGSYKEAFEKKHMQNSMLDINKIQKWKDALAEAADLAGWDSHSRSYRDDTELIQRIVKDVLQKLIYHYPPNDFKGLVGIQEKSAPLESLLREARSVGIWGIGGIGKTTIARYIFDKYSHGFEGSCFLENIRERSGDHVQGLHDLRDQLYSVLLNEKVRQSSTAKSTFVECRIRRQSNFIVLDDVSSSKQLKYLVGELESYGPGSKIIITTRDKSVLQNRRVEKIHEVAGLDSPASLTLFSLNAFNEDSPEVGYKELSRKAVNYCKGVPLALVVLGSFLHSKTEAEWESALNKIEKIPNEEIQTVLRLSYDELDYEEQQIFLDIACFLKGELKENIVSLLDSCSLYPVIGMRSLLDKALITISNDSVGMHDLIQQMGWEIVRQESIENPEDRSRLWDLDDTCDVLKNNKGTGAIQGMKLDTYQIRQNLSLSVDTFKKMPNLKYLKFFISIREHGKLSGLQLPEELESFSEKLRHLEWHAYPLPSLPSNFCPEKLVTLQMPNGQFRRLWNKMQDLVNLKDVNLAGCQELVELPDLSKAKNLRNVDLFGCRSLSNIHPSILSCSTLERLDLTGCSKLETLESQTHFKSLWHLNVSGCKSLAKFSVSSEEVEVLDLMMGVKVLHPSIGRFSKARILHVDGHRLENLPKELSCLKSLETLSLHRCSRVSSKENLHLVFNGLQSLRELYFMDCHYLFELPDNINQLSSLQKLALDGSYVVRLPETIKHLSALETLSLKGCRRLQSLPELPSSIIRLEADNCTLLPIASSSLTNFRPKEDGRSDDSFHNCVNFHVQKHTDSFHQYLRDLAHRYELRRIKRRGGGGRRTMFADINFRIFYQDHRIPKWFTYQTKGASITFELDQPYDLCSSFVLCVVIAPCWPSPIKYGLILQYQCHLEDSDMNKYSTSKILLDDVPAERDFDHIYMSFDRGGIIEAIKAYKLKYGSQSESYKGNLKVTIEFYFYCCTFQWSQDHDWLIRECAVYPLVAPDSQLKQVELKLELGMENKRPRGILEMEHTEGGVGVGSSSDRGPLPSTKKFKELC 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00712 1302 Pfam PB1 domain 25 114 IPR000270 GO:0005515
Aip09g00712 1302 Gene3D - 160 330 IPR035897 -
Aip09g00712 1302 CDD PB1_UP2 9 113 - -
Aip09g00712 1302 MobiDBLite consensus disorder prediction 121 155 - -
Aip09g00712 1302 Pfam NB-ARC domain 361 577 IPR002182 GO:0043531
Aip09g00712 1302 SMART till_3 162 302 IPR000157 GO:0007165
Aip09g00712 1302 ProSiteProfiles TIR domain profile. 161 330 IPR000157 GO:0007165
Aip09g00712 1302 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 155 1035 - -
Aip09g00712 1302 SUPERFAMILY L domain-like 634 1015 - -
Aip09g00712 1302 MobiDBLite consensus disorder prediction 1278 1302 - -
Aip09g00712 1302 SUPERFAMILY Toll/Interleukin receptor TIR domain 159 305 IPR035897 -
Aip09g00712 1302 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 155 1035 IPR044974 GO:0006952
Aip09g00712 1302 Gene3D - 331 491 IPR027417 -
Aip09g00712 1302 Gene3D Ribonuclease Inhibitor 679 875 IPR032675 -
Aip09g00712 1302 Gene3D Ribonuclease Inhibitor 876 1036 IPR032675 -
Aip09g00712 1302 SUPERFAMILY CAD & PB1 domains 24 118 - -
Aip09g00712 1302 SMART PB1_new 21 115 IPR000270 GO:0005515
Aip09g00712 1302 Gene3D - 496 579 IPR042197 -
Aip09g00712 1302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 325 589 IPR027417 -
Aip09g00712 1302 Gene3D - 23 114 - -
Aip09g00712 1302 PRINTS Disease resistance protein signature 361 376 - -
Aip09g00712 1302 PRINTS Disease resistance protein signature 437 451 - -
Aip09g00712 1302 PRINTS Disease resistance protein signature 530 544 - -
Aip09g00712 1302 PRINTS Disease resistance protein signature 987 1003 - -
Aip09g00712 1302 MobiDBLite consensus disorder prediction 133 149 - -
Aip09g00712 1302 Pfam TIR domain 162 344 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00712 Aip-Chr9 8634982 8639880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00712 157 1031 WRKY Transcription Factor Family AT4G12020 32.848 4.23e-106 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00712 - - ahf:112710162 2517.27