Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00711 ATGAAAACGAGGTTGGTGTTTGTAATGGTAATTGTTCTGGCAAAGATAGTAGCCGCAGCTACGCAAGCCCTTCCTGGTTGCACTGAAACATGTGGGGATGTTTTAATTCCATACCCGCCGTTTGGCATAGGAGTTCCATCAATCACCAGTAAAAGCTGTTTCTTGAAACAAAGCTTGGAACTTGTCTGCAAAGACTCAACTTTATATCTCAGAGGCGTTGACCTCAAAATATGGAAGATCTCCCTCAAAAGTCAACTGGGCATGCCTGCTTTGATTTCCAAGGTAGGTAGAGAAGATCACAACCAAGATAATAACAGAGTAAGAAAGCAAGGCAACGAAGCCAGACTTCCTATAGGGACGGCTTTCGTGACTTCTAAGGAAGAAAACAGCTTCGTAAGTGTAGGGTGTGACACTTACGGGTTCATCAATAATATTATTCATGGCAGCATAGAGAACACAACAGGGTGCTTGACAAGGTGCAATAACATGGCTGATATTCAAAACGATGAGAGTTGCACGGGGATAGGGTGCTGTAAGGTGGATATTCCTCTTGCCATGAAGAACAATAATATCAGCATAGAGGCGAATAGCTTCTCCAATTTCAACACATCGTGGGGATTCAACAACTGCAGCTACTCCTTTATGGCAAAAAAGGGTGGCTACGAATTTTCGGTGAGTCATTTGATGAAGGGGGCATCGTTGGAGAGGGTTCCCATGGTTATTGATTGGAGCGTTGGAGAACTGGGTCGTGAAGTTTCCCGCCAAAACATCTATCGGCATATATGCAGGGGCTTCGAGGGAAATCCATACGATCTGGAAGGTTGCCGAGATAACACCCATAATTGCATCAGTGAACATCATTGCCGTGAAACTGAAGGGTCGTTCGAGTGCTTTTGTCCTGCTGGGGAATCTGGAGATGGAAAAAGGGAAGGTAAAGGATGCCACCGAACCCTTGTACTTACCAAGGGTGCAATAATTGGTTTAGGCGTTGGACTTCTAATCCTGATTGTAGGAGCTTTTTGCATATACCTGAGGGTTGTTGCTATCAAGAAGTTCAGGGAACTAGATCAGAACGTAATCGAGGAATTCATTGATTGGTTGGTTCTTCTAGAACAAATCAGGCATAGGAATGTGGTCCCCATCTTGGGTTGTTGTTTAGAGAGTGAAGTTCCTTTACTGGTTTATGAATTTTTCAATAATGGTACCGTTTTTGACCACCTACACAAGGAAGAGAAGATCAACTTATCATGGAAAACTCGTCTACAGATAGCAACAGAGGCAGCTAGAGCTCTAGATTATTTGCACTCAGGTGCCACAATACCAATTATCCACTCAAAGGTCTCAAGTGGCAATATTCTCCTTGATGACACTTATACTGCCAAATTATTGTTTGATTTTAGGAATCTAAGTTTGAGTTCGATGCATGAAATTGGACTAGATCTTTATTATTTGGACCCAGAGTATATTCACACGGGCCAACTTACTGAGAAAAGTGATGTGTATGGTTTTGGTGTCGTTCTCGCCGAACTGATAATAGGGGAGAAAACAATTCATGTTGAGAAACCAGATGGAGGATTTCCCTTTCTTGCTAAGCAGTTCATCTTAACCTTGGAAAAGAATTGCTGGCTTGATATTCTTGAAACTGGGATTGTGAATAAAGAAAATGAAGACGAATTCATCCAAGTTGCTCTACTTGCAGCAAAGTGTTTGAGACTTCATGCAAAAGAAAGGCCTAGCATGGGAATGGTTGCAATGGAGTTGAAGAATATAAGACAGAAGCATCAAATCAAACACAATTCAGACCTAAGTTTGACCAAGAGTCTTCGCTTGTTTGACGATCCATCTGGCACATTTGAGCATGGCAGTAGTAGCACTAGCAGTGTCCAAAACAGTGGCTACGAATCGTGTACCGATTCAATGCAAGATGGATTGTATTCAGTAATATAA 1947 0.4227 MKTRLVFVMVIVLAKIVAAATQALPGCTETCGDVLIPYPPFGIGVPSITSKSCFLKQSLELVCKDSTLYLRGVDLKIWKISLKSQLGMPALISKVGREDHNQDNNRVRKQGNEARLPIGTAFVTSKEENSFVSVGCDTYGFINNIIHGSIENTTGCLTRCNNMADIQNDESCTGIGCCKVDIPLAMKNNNISIEANSFSNFNTSWGFNNCSYSFMAKKGGYEFSVSHLMKGASLERVPMVIDWSVGELGREVSRQNIYRHICRGFEGNPYDLEGCRDNTHNCISEHHCRETEGSFECFCPAGESGDGKREGKGCHRTLVLTKGAIIGLGVGLLILIVGAFCIYLRVVAIKKFRELDQNVIEEFIDWLVLLEQIRHRNVVPILGCCLESEVPLLVYEFFNNGTVFDHLHKEEKINLSWKTRLQIATEAARALDYLHSGATIPIIHSKVSSGNILLDDTYTAKLLFDFRNLSLSSMHEIGLDLYYLDPEYIHTGQLTEKSDVYGFGVVLAELIIGEKTIHVEKPDGGFPFLAKQFILTLEKNCWLDILETGIVNKENEDEFIQVALLAAKCLRLHAKERPSMGMVAMELKNIRQKHQIKHNSDLSLTKSLRLFDDPSGTFEHGSSSTSSVQNSGYESCTDSMQDGLYSVI 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00711 648 Gene3D Phosphorylase Kinase; domain 1 338 397 - -
Aip09g00711 648 ProSiteProfiles EGF-like domain profile. 271 315 IPR000742 -
Aip09g00711 648 ProSiteProfiles Protein kinase domain profile. 320 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00711 648 CDD EGF 275 307 - -
Aip09g00711 648 Pfam Protein tyrosine and serine/threonine kinase 347 585 IPR001245 GO:0004672|GO:0006468
Aip09g00711 648 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 345 600 - -
Aip09g00711 648 SUPERFAMILY Protein kinase-like (PK-like) 345 593 IPR011009 -
Aip09g00711 648 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 345 600 IPR045274 GO:0007166
Aip09g00711 648 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 18 344 - -
Aip09g00711 648 Gene3D Transferase(Phosphotransferase) domain 1 398 610 - -
Aip09g00711 648 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 344 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00711 Aip-Chr9 8631937 8634685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00711 346 599 Receptor kinase-like Gene Family AT3G25490 48.659 3.10e-67 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aip09g00711 PK_Tyr_Ser-Thr 4.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00711 - - aip:107616546 601.668