Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00706 ATGCGTCTGCTTCCTATACTTATCTTTGAAGAAACGTATGCATCAAGCCATCAACATTCTGTTCAAAGATATAAGGACGACAGTGAACTCATTCGACACATCGTCAAGGATGTCTTGCAAAAGCTGAAACAGAGACGTCCGAATACAACAAAGTACCTTGTTGGAATTGAGAAAACTCAGAAAGATATTGAAATGTTACTCCAAAATGCTAAAATTATTGGAATTTGGGGTCCAGGTGGAATAGGAAAGACGACAATAGGCAAAGTCGTATATAACAAACTCTCTTCCCAGTATGACAGTGTTTGCTTGATGGAAAATATATCCGAGGAAACAAGAAGGTATGGACTACCACGTCTGTGTCGTAACCTTTTCTCGGACCTGCTAAAAGAAGACAATCCAACTCATAATGTTCGGAGACTGCAAACTAAAAAAGCTCTAATTGTGTTTGATGACGTTGATAGTTTCAAGCAATTAGAATACTTATGCGAGGACTCTCAAGTGCTCAGTTACCTAGGAGAAGATAGCAGGGTCATTATTACATCAAGAAACAGGCATTTGCTTGCTAACAAAGCTGATGAGATTTACGAGGTCAAGAACTTGAACCTTACAGAGTCTCTAAAGCTTTTTAGTTTGAAAGCCTTCAGCAAAAGCTATCCTGAAGAGGGATATGAGAAACTCTCTAAGCAAGTGGTTGAATACACAGGAggaattccTAGAATACAAATGCATGGCTTGTTACAAGAGATGGCTTTGGATATAGTTCGTCGAGAATCCGAACTGAATCCTGGAGGCCGCAGCAGATTGAGGGATGTCAAAGACATTCGTGATGTACTTGAAAATAACACAGGAACTAATGCAGTTGAAGGCATAGTTTTGGACTTATCTCAGATAGAAGATTTACAGTTGAGTGCAGATGTATTCGAAAAGATGAATAGGATAAGGTTTCTGAAATTCTATATCCCCAGAAGTAAGAGTTCCAGTGAGAAGTATCTCCCTGAAGGCCTTACGCAATTTCCTAAAGAATTGAGGTACCTTCAGTGGGACGCGTACCCTTTGAAATCTCTTCCGCTGAGATTGTGTTTTAAATTTCTTGTTGAGATTCACATGCGACACAGCAATGTTGAAGAGCTTTGGCAGGGAAAGAAGGATCTTCACAATCTAGAAGTAATTGACCTATGTGAATGCAGAAAGTTGATGAACCTTCCAGATTTGTCTAATGCATCAAGACTTAGAACGGTGAATCTCTCCGGTTGTGAGATGTTGCATTATCTTCATCCAACAGTTCTATCTGCTGGTAAGCTTGCTACTTTGATACTGGATAGGTGCAAAAATCTCATGGAGGTTAAAAGTGAGAAGCGGTTAGAGTCTTTAGAGAAGATCAGTGTCAATGGTTGCTTAAGTCTCAAGGAATTTGAAGTTTGGTCAAGTTTAATTGAAAAATTGGATCTAAGCAAGACAGAAATTGAAACATTGCACACATCCATTGGACATATGGAGAATCTTAAGTCCCTCAATCTAGAAGGTTTAAAACTTAAGCATCTTCCAAATGCGTTGTCCGGCTTGAAATCCCTAAAATATCTTAATCTTTCTCGCAGCGGAGTAGAATTTGACAAACCCCAGCTACATGTGTTGTTTAATGGCTTACAGTCACTAGAAAAACTACATGTAACAGATTGTAGTAACTTGTTTGAGCTTCCTGACAACATCAACGTCTTACAGAAATTGCAAGAATTAAGGCTTGATGGGAGCAGCATAGTGACACTGCCAGAAAGCATCAAGCACCTTAGAGTGCTGAAAGTTTTGTCGTTGGAGAATTGCAATAAGCTTGTGAGTGTGCCAGAGCTACCACCATCCATCACGGTGTTCAATGCCAGTAACTGCACTTCATTGGTATCGGTATCAGTATCAACTTTAAGGATGATGGGAAAAACGAAATGCATTTCGTTCAAGGATAGCTTGAAGCTGGATAAATATTCACTCCCTTATTCTATCACGGAAAGCCTCCACTTAACAATGATGAGTGCTGCATTTCACAATGTGCTAGTAAGAGTTTTCGACAACAAGCTCCATAGTTACAACTACGTCAAGGTTCGAGGTTGTCTACCAGGAAGCAGAGTCTCAAGGCACTTCAAGAATCGAACAAGAGGGTCCACCATTACTATTAGACTCCCCAGCTGCACCTCAGTGCTGGGATTTCTTCTTTCAGTGGTTATCTCTCCAGGTGTTGCTAATGCTAACATTTACTGCAGATGTTACTCAGCAGATGGGACACCTATCGGTGAGAACACTCGATGGTACTCTGTGATTGAAAGCTTGAATTCGGATAATGTGTTTATGTGGTATGATCCATACTTCAGTGACAGCATTCTCAAGCTTCATGAAACACATGTCTCTTTCAAATTCTATAGTGAAGAAGGATTGGAATTGGATATAATAAAAGAATGCGGTGTCCACGTAATAGGTCCCTCTGAGTTCCACAGTGTTTTAGGGGAGATGGATTTGGAGTATGAGCAGAAAGTGGAGTTGGGAGTGAAGTTAGGATTGGCGTTAGACATCCAGCGCCAGGTGGATTCTAACGTGGATTTGCCTAATTTGCTGTTTGCGTTCGAGTATGGATGGAAGTTACAACCGCCAATGCAATCTGAGCTTGAATCACGACGCAGAGCCATGGCCGATGTAATTCGGAAACAGATGTGGGACCTCATCTTTCCACCTTGTCCAGCTGCTGGAATGTGGGGAAACATCACACAGGATTTTGAAGATAGAGGGCTGGGCAGCGGCCATGGCGGTGAAAAGGTAAGGAGTAAGGACAAGGGTATCGCCAGAGTTTCGCTGCTGCCATCGGAGTTTGCACCGTTTGGGAGATAA 2868 0.4132 MRLLPILIFEETYASSHQHSVQRYKDDSELIRHIVKDVLQKLKQRRPNTTKYLVGIEKTQKDIEMLLQNAKIIGIWGPGGIGKTTIGKVVYNKLSSQYDSVCLMENISEETRRYGLPRLCRNLFSDLLKEDNPTHNVRRLQTKKALIVFDDVDSFKQLEYLCEDSQVLSYLGEDSRVIITSRNRHLLANKADEIYEVKNLNLTESLKLFSLKAFSKSYPEEGYEKLSKQVVEYTGGIPRIQMHGLLQEMALDIVRRESELNPGGRSRLRDVKDIRDVLENNTGTNAVEGIVLDLSQIEDLQLSADVFEKMNRIRFLKFYIPRSKSSSEKYLPEGLTQFPKELRYLQWDAYPLKSLPLRLCFKFLVEIHMRHSNVEELWQGKKDLHNLEVIDLCECRKLMNLPDLSNASRLRTVNLSGCEMLHYLHPTVLSAGKLATLILDRCKNLMEVKSEKRLESLEKISVNGCLSLKEFEVWSSLIEKLDLSKTEIETLHTSIGHMENLKSLNLEGLKLKHLPNALSGLKSLKYLNLSRSGVEFDKPQLHVLFNGLQSLEKLHVTDCSNLFELPDNINVLQKLQELRLDGSSIVTLPESIKHLRVLKVLSLENCNKLVSVPELPPSITVFNASNCTSLVSVSVSTLRMMGKTKCISFKDSLKLDKYSLPYSITESLHLTMMSAAFHNVLVRVFDNKLHSYNYVKVRGCLPGSRVSRHFKNRTRGSTITIRLPSCTSVLGFLLSVVISPGVANANIYCRCYSADGTPIGENTRWYSVIESLNSDNVFMWYDPYFSDSILKLHETHVSFKFYSEEGLELDIIKECGVHVIGPSEFHSVLGEMDLEYEQKVELGVKLGLALDIQRQVDSNVDLPNLLFAFEYGWKLQPPMQSELESRRRAMADVIRKQMWDLIFPPCPAAGMWGNITQDFEDRGLGSGHGGEKVRSKDKGIARVSLLPSEFAPFGR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00706 955 Pfam NB-ARC domain 66 238 IPR002182 GO:0043531
Aip09g00706 955 Pfam Leucine Rich Repeat 363 382 IPR011713 -
Aip09g00706 955 Gene3D - 36 198 IPR027417 -
Aip09g00706 955 Pfam Leucine rich repeat 479 531 IPR001611 GO:0005515
Aip09g00706 955 PANTHER NB-ARC DOMAIN PROTEIN 239 686 - -
Aip09g00706 955 SUPERFAMILY L domain-like 291 661 - -
Aip09g00706 955 PANTHER NB-ARC DOMAIN PROTEIN 26 238 - -
Aip09g00706 955 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 239 IPR027417 -
Aip09g00706 955 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 239 686 IPR044974 GO:0006952
Aip09g00706 955 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 238 IPR044974 GO:0006952
Aip09g00706 955 Gene3D Ribonuclease Inhibitor 477 676 IPR032675 -
Aip09g00706 955 Gene3D Ribonuclease Inhibitor 264 476 IPR032675 -
Aip09g00706 955 PRINTS Disease resistance protein signature 382 398 - -
Aip09g00706 955 PRINTS Disease resistance protein signature 72 87 - -
Aip09g00706 955 PRINTS Disease resistance protein signature 139 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00706 Aip-Chr9 8538854 8542444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00706 478 665 WRKY Transcription Factor Family AT4G12020 30.769 1.53e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00706 - - aip:107614919 1423.3