Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00684 ATGGCAGCTAGGTATGATCTCATCAAGTGTATCAATGCTGGTCCAGAGCATAAGGCACCTATTGAGATGGTTGTCTTTGATGAAGAGGGGGATACAATTCAATACTCTATTAAAGGCATATTTGTTCCTATCTTCGAGGGCCTACTCGCTGAGGGCAACGTGTACGTGGTCACTAATTTCACAATTTCTTTGAATACCATCAAGTTCAAGCCTACTAGACACGAATTTAGAATCAACTTCAAGAGGGACACGAATGTGCGTCCGGTACAAGACTCTTCAGTTTCATTGAACGGATTCAATTTTGTTCTGTTCAAAAAAATTCATGCAGAGTCTAAAGAAGATGGTTATTTAGTTGATGTGATAGGTCGACTTGCCTCTAAGGGTAACTTGGTCGAGTTCACACGGGACGGGAAGCCGTCAAGTTATATCACGATAGAACTTGATGATCTTGAGGGTGGACAGAAATTAAGGGTAATGTTGTGGCAGACTTTGGCTTTTAACTTGATCAAATATTTGGAGGAACACCCATGTCTTACCTATGTGGTTATTCTCCAAATGGGCAAGATGAAATTTTATAGTGGGGTCATGGGTGTTTCCAACATAATCTACAATTCGAAACTATTTATCAATGTTGAGTTTCCTGCTGCCAGGAATTTCTTTACAAGGGTGAACAAATTGGATCATGTTGACGGACAAAGCATAATGCTGCTGGTCTGTGATCAACCTGTTTCAATTGAGGAAGATTTTTTGCGTCTGTCAGTCTACAAAACAATTGCCGAGATAAAGGAGCATAATCAGGTAAAATTCTTTCTTTATTAA 819 0.3968 MAARYDLIKCINAGPEHKAPIEMVVFDEEGDTIQYSIKGIFVPIFEGLLAEGNVYVVTNFTISLNTIKFKPTRHEFRINFKRDTNVRPVQDSSVSLNGFNFVLFKKIHAESKEDGYLVDVIGRLASKGNLVEFTRDGKPSSYITIELDDLEGGQKLRVMLWQTLAFNLIKYLEEHPCLTYVVILQMGKMKFYSGVMGVSNIIYNSKLFINVEFPAARNFFTRVNKLDHVDGQSIMLLVCDQPVSIEEDFLRLSVYKTIAEIKEHNQVKFFLY 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00684 272 CDD RPA1_DBD_A_like 21 86 - -
Aip09g00684 272 Pfam Domain of unknown function DUF223 22 111 IPR003871 -
Aip09g00684 272 SUPERFAMILY Nucleic acid-binding proteins 19 92 IPR012340 -
Aip09g00684 272 Gene3D - 94 229 IPR012340 -
Aip09g00684 272 Gene3D - 4 92 IPR012340 -
Aip09g00684 272 SUPERFAMILY Nucleic acid-binding proteins 99 223 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00684 Aip-Chr9 8316291 8318172 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00684 1 264 Core DNA Replication Machinery Family AT2G06510 25.000 8.22e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00684 - - aip:110266743 488.419