Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00670 atgCTGTCGCCCAATATCCTTCGTGGCGCCGCACGTATTCCTCATTGCATCACCCCCGCCCCGCCCCGTCGTGCCATCACAACATCTTCTCCTGCGCGCTGCAGCAACTATCGACCATGCAAGTGCAGCCACCGTTTGTCCTCTTCTCCCCTGCGTCGCACCGCACGTTCTGGACGAAGACTTGCCCACCCTGTCGCGCCATCACAGCTTCCTCCCCACGCGCCGCAGCAACCACTGACCATGCAAGTGAAGCCATCATTCGCCCTCTTCTTCCTTGCGTGGCACTGCGCGTTCCAAACTAAGATGCTACCGGTCTACTTCCGCATTCTCCAGTCGCCACCAAAGATGGGTGAGGAGGTGAAAGCAATTGTTCCCGAGTCTGTGCTTAAGAAGCAGAAGAGGGAGGAGGAATGGGCCTTGAAGAAAAAGGAGGAACTTAATGCTGCAAAGAAGAAGAGAGCTGAGAGCCGCAAGCTCATTTACAGCAGGGCAAAGCAATATGCAAAGGAATACCAGGAGCAGGAAAAGGAACTGATCCTAATTATATTCTAA 552 0.5399 MLSPNILRGAARIPHCITPAPPRRAITTSSPARCSNYRPCKCSHRLSSSPLRRTARSGRRLAHPVAPSQLPPHAPQQPLTMQVKPSFALFFLAWHCAFQTKMLPVYFRILQSPPKMGEEVKAIVPESVLKKQKREEEWALKKKEELNAAKKKRAESRKLIYSRAKQYAKEYQEQEKELILIIF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00670 183 PANTHER 60S RIBOSOMAL PROTEIN L7 120 180 IPR039699 -
Aip09g00670 183 Pfam Ribosomal L30 N-terminal domain 124 179 IPR012988 -
Aip09g00670 183 PANTHER 60S RIBOSOMAL PROTEIN L7 120 180 - -
Aip09g00670 183 MobiDBLite consensus disorder prediction 48 76 - -
Aip09g00670 183 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00670 Aip-Chr9 8003604 8004868 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00670 119 179 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 75.410 5.15e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00670 K02937 - gmx:100813342 78.9517