Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00669 atgggcggcataggaaaaacaactattgcggctgccatttttcaagagttctctcCCAAGTACCAAGGTAGTTGTTTCTTGGCCAATGTAAGAGAAGAATCTTCAAGGCATGGCCTCAGCTACATATTCAATAGACTTCTTTCTGAGTTGCTGCAGGAACATGTTCATATTACCACTCCAAAGATTGTGTCTTCTGCTATACTCCGCAGATTGAGGCGTAAGAAAGTTTTCATAGTGCTAGATGATGTGAATACTTCTGAGCTTTTAGAAAATTTGCTTGGAGTGGGACAAGATTATCTTGGAGTTGGTAGCAAAGTTATTGTTACCACCAGAGATAAGCATGTTCTTCTGAGTAGATCGGTTGATCATATCCATGAAGTCACAGAAATGAATGAGGAGAACTCTCTCAAACTCTTTAGCTTGAATGCCTTCAACAGAACCCATCCTCCTGAAAATGAATACTGGGAGCTATCAAAAAGGgcacttgcttatgccagaggaaatcctttagctttgaaaGGATCCGCTACGATTGAAACCATATACTTGGATATGACTCAGCATACAGAAATTTGTATAAGCTCCAACGCATTTAGAAAGATGCCAAAGCTAAGGTTACTTGCTTTTGCTAGCAGCAGCATTGATTATGGGAGAAAGAGAGTTGATTATACATTGAGTCTTCCAACAGCTCTGGAGTTGCCTAATAACTTGAGATACATTCAATGGGATGGATGTCCATTAAAATCTCTATCGACTACTTCTTGGCCTAGCAAGCTTGTTGAACTCTCCATGCCATACAGTAATGTTGAAAAGCTTTGGGATGGGCCACAGAGTTTACCGAGCTTGGAGGAAGTTTATCTCAGTGGTTCGAAGCGAATGATAGAGTGTCCAGATTTTTCAGGTTCTCCAAATCTCAAAGCAATATGGCTAAATCATTGTGAAAGCTTGCCTCATGTTCATCCTTCTATTTTCTCCCTTCCAAAACTTGGATTTTTAGCTGTGTATGGATGCAAAGAACTTAAGAGCCTAAGCAGCAACAACTGTTCAACTTCCCTTGAAAAAGTTGTTGCCTATGGCTGCCCAAATCTGCAAGAATTCTCAATCCCAATTTCAAAAGATCATTCTGATATTCATGTGCATTTGAGGTCAACTGCCTTGAAACAACTACCATCATCAATTGTGCATCTTCAACATCTTGTGAACTTCTCCTTTCCAATCAGCGATCTCCTCATGGATCTTCCTGAAAAGTACACCAATCAAATCATGCTTTCAGACCCTAATAACCAAGAATCTGACTCAGTGGCCACCTTACGTACAATCCTACCTAGCCCTATCTTCCATTATCTAAAACAACTGAAATTTGATGGATGTCAAAGCTTATCTGAACTCCCAGACAATATTTCTTCATTATCATCATTGTTGTACCTAAGCTTTCATAACACTAATATCTCAGGCTTTCCAGAAAGCATTAAGAATCTTCCGCGGCTCAAAGTTCTTTTTATTTGTCATTGTGAAATGCTACAACTTATTCCGGAGCTTCCACCTTCCGTTCATTGCTTTAGGGCTTGGGATTGCAAATCTTTGAGGACGGTGTTAAGTTCAAGTGAACCACCAAAAACACGGCAAGAAAGCAGAAATGAAGAATGCACTGTTGTTGATGATGGTGATGGTTATGTCAGTGAGCATAATCCTAATGTTGGCAAGGTTTGTTATTTCTTGCCAGTTAGAGGCAGGAAACTTGATGACTTGTTCCATCATTGCTCTTCACAAAATTCCATTAGCATTCAACTGCCACTAAGTTCCAATTTCTTTGGTTTCCTATTTTACTTGGTTGTTCCTCCAATACAACCATGTAACATGGGTGAAGTATTTGAAATTAGGTTTGGATTTGAATGTTACTTGGAAACAAGTTGGGGTGAAAGGACCCATATAGCAAGTTCGTCCTCAATAGAATGGCACTGCGACTTTAGGCCTGGACTTGAGATGAATGTGTTGTCAGATCATGTGTTACTGTGGTATGATTCACAATGCTGTAAGCAGATAATGGAAATAATAGGAGGAAGAAATGTCATTGATGATGACAAGAATACGAATCTGGCAGTCACGTTCTTTGCTTGCCTACCAAACAAGGAGGAAGTGGCTATAAAAGCGTGTGGCATCCGTTGGATATACACAAATATGGAGAAGGAATCAAGAGGCTGTAGATTCAAGAGAAGTAGGGAAGTTTTTGAGTCAGAAGCCATT 2244 0.3815 MGGIGKTTIAAAIFQEFSPKYQGSCFLANVREESSRHGLSYIFNRLLSELLQEHVHITTPKIVSSAILRRLRRKKVFIVLDDVNTSELLENLLGVGQDYLGVGSKVIVTTRDKHVLLSRSVDHIHEVTEMNEENSLKLFSLNAFNRTHPPENEYWELSKRALAYARGNPLALKGSATIETIYLDMTQHTEICISSNAFRKMPKLRLLAFASSSIDYGRKRVDYTLSLPTALELPNNLRYIQWDGCPLKSLSTTSWPSKLVELSMPYSNVEKLWDGPQSLPSLEEVYLSGSKRMIECPDFSGSPNLKAIWLNHCESLPHVHPSIFSLPKLGFLAVYGCKELKSLSSNNCSTSLEKVVAYGCPNLQEFSIPISKDHSDIHVHLRSTALKQLPSSIVHLQHLVNFSFPISDLLMDLPEKYTNQIMLSDPNNQESDSVATLRTILPSPIFHYLKQLKFDGCQSLSELPDNISSLSSLLYLSFHNTNISGFPESIKNLPRLKVLFICHCEMLQLIPELPPSVHCFRAWDCKSLRTVLSSSEPPKTRQESRNEECTVVDDGDGYVSEHNPNVGKVCYFLPVRGRKLDDLFHHCSSQNSISIQLPLSSNFFGFLFYLVVPPIQPCNMGEVFEIRFGFECYLETSWGERTHIASSSSIEWHCDFRPGLEMNVLSDHVLLWYDSQCCKQIMEIIGGRNVIDDDKNTNLAVTFFACLPNKEEVAIKACGIRWIYTNMEKESRGCRFKRSREVFESEAI 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00669 748 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 184 528 - -
Aip09g00669 748 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 172 - -
Aip09g00669 748 Pfam NB-ARC domain 1 173 IPR002182 GO:0043531
Aip09g00669 748 PRINTS Disease resistance protein signature 165 179 - -
Aip09g00669 748 PRINTS Disease resistance protein signature 491 507 - -
Aip09g00669 748 PRINTS Disease resistance protein signature 70 84 - -
Aip09g00669 748 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 184 528 IPR044974 GO:0006952
Aip09g00669 748 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 172 IPR044974 GO:0006952
Aip09g00669 748 SUPERFAMILY L domain-like 181 530 - -
Aip09g00669 748 Gene3D - 1 123 IPR027417 -
Aip09g00669 748 Gene3D Ribonuclease Inhibitor 124 376 IPR032675 -
Aip09g00669 748 Gene3D Ribonuclease Inhibitor 377 543 IPR032675 -
Aip09g00669 748 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 173 IPR027417 -
Aip09g00669 748 Pfam Leucine Rich Repeat 258 275 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00669 Aip-Chr9 7977848 8000558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00669 174 501 WRKY Transcription Factor Family AT4G12020 31.657 7.64e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00669 - - aip:107614895 908.672