Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00652 ATGAGGGCTTTCATTGTGTTAGATGATGTGGCTGATTCACAAATTGCAACTGATTTGATTCAACTGCTTTGTAATTGTTTAAATTCTGGTAGTAGAATCATTTTGACAACAAGAGACAGAAATGTGCTATCAAGTGGAGGAGTTGAAGCAATTCATGAGGTGAAGGAAATGAATTTTGAAGACTCCCTTAAAGTTTTTAGCCATAATGCCTTTAATGATTCTCATCCTAAAGAAGATTATTATGAGCTATCAACAAGAGTCGTAGCAGATtatgccaaaggaataccattaacattaaaaattctgggatcattttttcgggctatcaaaagaaaaagtgaatgggagagtgcattgagaaaactaaaaaagtatcccaatgcagatattcagcaagtgttgagactgagttatgatgcattagataatgatgaaaaaaacatccttctagatgttgcatgcttttttcACAGGTATAAAATGGAAGAAGTAACAAGAATATTAAATTCTTGTGGTTTCTTTGCAGACATAGGAATAAAAAGCCTATTGGACAAGGCTCTTATAAGTGTTGCTTCAGATGATTGCATAAAAATGCATAGCTTGATACAGAAAATGTGTTGGAAAATCATTCATGAAGAATCTAACGAAAATTGCGGTCAACAAACAAGACTGTGGAATACCGAAGAAGTCTGCAATATATTCCAACATGAAAGAGATATTCATGGAGTTGAAAGTATGATTGTGGATATGAATGAAATTACAATAGATCCACGTATAATCATCATTGCATTAAGGAAGATGCCAAAGTTAAGATTGCTTGCTTTAAGAGGAAATATCAATTTAGATCTTGAATGGAACATAGTGTTTGTAAAGGATTTTCAACTTTCGAATGACTTAAGGTATATTGAGTGGAATAAATGCCCACTTAAGTTTCTGCCGTCTATTTGTTGGCCTCAAAAACTTGTTCAACTTTCTATGCGAGGTAGCAATATTAAAAAACTTTGGGATACAAAACAGATGCTACCAAGTTTGGAGATGATTGATCTCGGTAGATGCAAAGATTTGATAGAGTGTCCAAATTTAACAGGTGCCACGAATCTCAAAAAAATATCATTTTATGGCTGTGAAAACTTACAAGATGTTCATCCATCTATTTTCTCTCTCTCCAAGATTGAAGACATATATTTGGATTATTGCAAGAAGCTGAAAAGGCTTTACAGTGATTATTGTTCACCCTCTCTCAGTTACCTGTGGACTATTGGTTGCTCGAATTTGGAAGAGTTCTCAATCCCAATGATAGGGGATCATTCTAAAAGCTTATATTTATCGTCCTCAGCTTTGAGTGAAGAGTCATCTACTATTATGCATCTCAAAAATCTTACCACGTTCGGTATTAACATCAGTTACTCTATTGAAAAACTTCCTCAAAACTTTGCGCGCACAATTGCACTGATGGATCCAATAAAACATGAAGATGACACATGCATTATTTTAAGTAGAATATTGCCCACCCCTGTCTTCTTGTCTCTCAAGCGATTATCTTTCGAGCATTGTAAGAGTTTGTCTAAACTCCCAGACAACATTCATGTCTTACAATCATTACAGGAATTATCATTGGAGAGTTGTCATGCCATTACAAGTTTGCCAGAAAGCATTAAGAATCTTCAAAAGCTCATACAACTCTTCATCGATGATTGTAAAATGCTTCAATATGTACCTCCACTTCCCCCATCTATTATATACTTTGCTGCAAGAAATTGCAAATCTTTGAAGACAATCTCAAGTTTAACAAGTGAACCACCCAAAACACACTGGGCATCCTTTAAATTCTATAACTGCACAAAGTTGGATGATGATGCATATGAAGCAGTTTTGAAAGACTTGAAATCCAGGATAGAACTTGCGGCAAGTAATGAATGTTCGAATATATCCTTCTACTATTTACCAAGTAAAGAGAGCATACTTAATGATTGGTTCCCTCACTACTACTCTACAGAAACTTCAATCACTGTGGAAGTTCCTCCAGATCACAAGATTTCTTCTTGTCTTGTTGTCTGCATGTTGTTTTCTCAATTCCAATCTCGCGACTTTAGCAACAAACATTTGACATTCAGGTGTGAATGCTACTTAGAAAAGGGTTGCAACGAATGGGAATGGATAGCAACTTCTGGCAAAACAGTACACTTGACCGATCATACGTTCTCTGTGAATCAATTTGAAATGATATCAGATCATATGATATTATGGTATGATGGAGAGTATTCGAACAAGATAATGGAAGCAATCAAAGAGAGAAAGAGAGGCACCACTTGCAATCCTATCCTTAAATTTGAGTTCTATGCTCATCAACCAGAGGATAATGAAGAAGTAGTGATAAAGGGGTGTGGGATCCGTTGGATGCATGTCAATGATGAAGAAGAGATTAATCCAGATGTCATTGATGAAGGAGAGATTATTCCTGATGTCATTATTGATGAGGGCCATGAATATGATCACTTGGAGTTGGAGGACCTTCAGAGAACTGGAAAAAGAGTGGATGTACATTGTTGTGCATTGGATATTGTCAATTGGTTCAAAAGATTGTTGTGGTGGAGAACAGAGACTAAAGAAGAGATATAA 2619 0.3326 MRAFIVLDDVADSQIATDLIQLLCNCLNSGSRIILTTRDRNVLSSGGVEAIHEVKEMNFEDSLKVFSHNAFNDSHPKEDYYELSTRVVADYAKGIPLTLKILGSFFRAIKRKSEWESALRKLKKYPNADIQQVLRLSYDALDNDEKNILLDVACFFHRYKMEEVTRILNSCGFFADIGIKSLLDKALISVASDDCIKMHSLIQKMCWKIIHEESNENCGQQTRLWNTEEVCNIFQHERDIHGVESMIVDMNEITIDPRIIIIALRKMPKLRLLALRGNINLDLEWNIVFVKDFQLSNDLRYIEWNKCPLKFLPSICWPQKLVQLSMRGSNIKKLWDTKQMLPSLEMIDLGRCKDLIECPNLTGATNLKKISFYGCENLQDVHPSIFSLSKIEDIYLDYCKKLKRLYSDYCSPSLSYLWTIGCSNLEEFSIPMIGDHSKSLYLSSSALSEESSTIMHLKNLTTFGINISYSIEKLPQNFARTIALMDPIKHEDDTCIILSRILPTPVFLSLKRLSFEHCKSLSKLPDNIHVLQSLQELSLESCHAITSLPESIKNLQKLIQLFIDDCKMLQYVPPLPPSIIYFAARNCKSLKTISSLTSEPPKTHWASFKFYNCTKLDDDAYEAVLKDLKSRIELAASNECSNISFYYLPSKESILNDWFPHYYSTETSITVEVPPDHKISSCLVVCMLFSQFQSRDFSNKHLTFRCECYLEKGCNEWEWIATSGKTVHLTDHTFSVNQFEMISDHMILWYDGEYSNKIMEAIKERKRGTTCNPILKFEFYAHQPEDNEEVVIKGCGIRWMHVNDEEEINPDVIDEGEIIPDVIIDEGHEYDHLELEDLQRTGKRVDVHCCALDIVNWFKRLLWWRTETKEEI 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00652 872 Pfam NB-ARC domain 2 139 IPR002182 GO:0043531
Aip09g00652 872 Gene3D - 57 142 IPR042197 -
Aip09g00652 872 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 468 - -
Aip09g00652 872 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 510 617 IPR044974 GO:0006952
Aip09g00652 872 SUPERFAMILY L domain-like 197 594 - -
Aip09g00652 872 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 151 IPR027417 -
Aip09g00652 872 Gene3D Ribonuclease Inhibitor 434 747 IPR032675 -
Aip09g00652 872 Gene3D - 1 51 IPR027417 -
Aip09g00652 872 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 468 IPR044974 GO:0006952
Aip09g00652 872 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 510 617 - -
Aip09g00652 872 Gene3D Ribonuclease Inhibitor 239 432 IPR032675 -
Aip09g00652 872 PRINTS Disease resistance protein signature 92 106 - -
Aip09g00652 872 PRINTS Disease resistance protein signature 339 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00652 Aip-Chr9 7734569 7741124 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00652 2 567 WRKY Transcription Factor Family AT4G12020 29.391 8.90e-55 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00652 - - aip:107614877 1217.6