Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00648 ATGCCACTTTCCGGTGCTTCTTCTTCTTATTCTCAAGCATCTGTCACTCATCaatacgatgtctttatcagcttcagaggtgaggacacgcgtaacggcttcaccagccatcttcattctgctctccgcagaaatcagatcgagacgttcatagattacagaatccagaaaggaggggccatctggaacgaacttgttgaggccatcagagactcaaacttgtttcttgttatcttctctgagaattatgcttcctcaaagtggtgcttgagagagctcgcggagatcattgaatgtaAGAAGGAGAATGAAAATGTGATTGTGATTCCAGTGTTCTACAGAATAGAACCCACACATGTTCGCAAGCAGAGCGGAACTTACCACACAGCATTCGCTGAGCACGAGAGATCTTTGGAGCGTAGCGTTGTGCAGCAATGGAGGACTGCACTCTTTGAAGCTTCCAATCTTTCTGGCTTCCATTGCGATCATCACAGGCAAGAAGCTGAGTTGATCGATGAGATTGTGAAAGCAATTTTTCCAAATCTAAATAGCAATTGCTATAGAGATGAACTCAAAAGCCCTTTTATTTGTAACAGAAACTATACTTCTGTTAAATCCTTATTGAAATTCAAGTCAGAGAAAGTTCTTGTGATTGGAATTTGGGGTATGGCCGGTATTGGCAAAACAACTATTGCTACTACTCTTTTTCATGAGTGCTCCTCAGAATACGAAGACCATTGTTTCTTAGCCTTTTCAAAAAATTTAGAAGGAAAAGGTCTTAATCACATATGCGCTAAACTTCTTTCGCAATTGTTAAATCAAGATCTTCGTATCAATAATATTCGAGTAATACACTCTAGTATTATCCGTAAACTCAAGCATAGGAAGGTTTTTGTTGTGCTGGATGATGTGACTAATTCACAAATTGCAGCTGATTTGATTCAACTGTTTCGTAATTGTTTGAGTTATGGTAGTAGAATCATTTTGACAACAAGGGATAGAAATGTGCTTACAAGTGGAGGAGTCGAAGAAATCCATGAAGTGAAGGAAATGAATTTTGAGGACTCTCTTAAACTTTTTAGCCATAATGCCTTTAATGATTCTCATCCTAAAGAGGATTATTATGAGCTATCAACAAGAGTCGTAGCAGATtatgccaaaggaataccattagcattaaaaattttgggatcatttcttcggaccaaagaaaaaagtgaatgggatagtgcattgagaaaattacgaaagtatcccaatgcagatattcagcaagtgttgagattgagttataatgcattagatgatgatgaaaaaaacatcctgttagatattgcgtgctttttttacgagcatgaaatggAGATGGTAACAAAAATATTAAATTCTTGTGGTTTCTTTGCAGACATAGGGATAAAAAGCCTATTGGACAAATCTCTTGTAAGTATTTATTCAAATGGTAGTTGTAAATACATAAAAATGCATAGCTTGATACAGGAAATGTGTTGGAAAATCATTCATGAAGAATATAGCAAAAATGGTGGTCAACAAACAAGACTGTGGAATACCGAAGAAGTCTGCAATATATTCCAGGATGAAAGAGATATTCATGGAGTTGAAAGTATGATTGTGGATATGAATGAAATTACAATAGATCCACGTATAATTATCATTGCATTAAGGAAGATGCCAAAGTTAAGGTTACTTGCTTTAAGAGGAAATATTAACATGGATCTTGAATGGAACAGAGTGCTTATAGAGGGTTTTCAATTTCCTAATGACTTAAGGTATATTGAGTGGGATAAATGTCCACTTAAGATTGTGCCATCTATTTGTTGGCCTCAAAAACTTGTTCAGCTTTCCATGCAAGGTAGCAATATTGAAAAACTTTGGGATACAGCACAGGTAGGATCATGA 1917 0.2749 MPLSGASSSYSQASVTHQYDVFISFRGEDTRNGFTSHLHSALRRNQIETFIDYRIQKGGAIWNELVEAIRDSNLFLVIFSENYASSKWCLRELAEIIECKKENENVIVIPVFYRIEPTHVRKQSGTYHTAFAEHERSLERSVVQQWRTALFEASNLSGFHCDHHRQEAELIDEIVKAIFPNLNSNCYRDELKSPFICNRNYTSVKSLLKFKSEKVLVIGIWGMAGIGKTTIATTLFHECSSEYEDHCFLAFSKNLEGKGLNHICAKLLSQLLNQDLRINNIRVIHSSIIRKLKHRKVFVVLDDVTNSQIAADLIQLFRNCLSYGSRIILTTRDRNVLTSGGVEEIHEVKEMNFEDSLKLFSHNAFNDSHPKEDYYELSTRVVADYAKGIPLALKILGSFLRTKEKSEWDSALRKLRKYPNADIQQVLRLSYNALDDDEKNILLDIACFFYEHEMEMVTKILNSCGFFADIGIKSLLDKSLVSIYSNGSCKYIKMHSLIQEMCWKIIHEEYSKNGGQQTRLWNTEEVCNIFQDERDIHGVESMIVDMNEITIDPRIIIIALRKMPKLRLLALRGNINMDLEWNRVLIEGFQFPNDLRYIEWDKCPLKIVPSICWPQKLVQLSMQGSNIEKLWDTAQVGS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00648 638 SUPERFAMILY L domain-like 493 632 - -
Aip09g00648 638 Gene3D - 188 343 IPR027417 -
Aip09g00648 638 ProSiteProfiles TIR domain profile. 17 182 IPR000157 GO:0007165
Aip09g00648 638 Pfam TIR domain 18 185 IPR000157 GO:0007165
Aip09g00648 638 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 634 IPR044974 GO:0006952
Aip09g00648 638 SMART till_3 18 156 IPR000157 GO:0007165
Aip09g00648 638 Pfam NB-ARC domain 205 433 IPR002182 GO:0043531
Aip09g00648 638 Gene3D - 13 187 IPR035897 -
Aip09g00648 638 Gene3D - 351 435 IPR042197 -
Aip09g00648 638 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 634 - -
Aip09g00648 638 Pfam Leucine Rich Repeat 616 632 IPR011713 -
Aip09g00648 638 PRINTS Disease resistance protein signature 291 305 - -
Aip09g00648 638 PRINTS Disease resistance protein signature 561 577 - -
Aip09g00648 638 PRINTS Disease resistance protein signature 217 232 - -
Aip09g00648 638 PRINTS Disease resistance protein signature 386 400 - -
Aip09g00648 638 SUPERFAMILY "Winged helix" DNA-binding domain 422 530 IPR036390 -
Aip09g00648 638 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 159 IPR035897 -
Aip09g00648 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00648 Aip-Chr9 7623755 7628188 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00648 7 631 WRKY Transcription Factor Family AT4G12020 29.589 6.24e-69 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00648 - - aip:107614877 1147.5