Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00646 ATGTCACTTTCAGTTGCTGCTGCTGCTTCTTCTTCTTCTCAAGCACCTCCCACTCATCGatacgatgttttcatcagcttcagaggggaagacacgcgcaaaggattcctcagccatcttcaagccgctttccgccaaaaccaaatccaaacattcagagacgatgacggcatggacaaaggaggtctcatctgggacgaacttgtcgacgccatcagaaactcaaacttgtttcttgttatcttctccaaaaactatgcatcctctaggtggtgcttgaaagagctggtggagatcatggaacgcaagaacaataacaatgtagtgattccagtgttctacagaatagagcccacacatgttcgcaagcagagtggaagttaccgcagagctttcgataagcatgagagatcttcggaggaccgttgccatgtgcaacaatggaggactgcactcactcgtgctgccaatctttctggcATCACCTTTGATGACCACAGGGTTGATGAAGCTAAGCTAATTAGTGAGATTGTAAAAGCAATTTTGCCACATTGTCTGAAGAAAAAGTGCTTCATAGATGGACTCAACAGACCTTTTATTTGTAACACAAACTATACTCGCGTTGAATCTTTGATGAGACGCAAGATGGAGGAGGTTTTTGTGATTGGAATTTGGGGTATGGGCGGTATTGGTAAGTCAACCATTGCTGAGGCTCTCTTCAATAATTATTCTTCTCAATATGAAGGCTCTTGTTTCTTGTCAAATTCAAGAGAATTAGGAAAGCCATGTCTCATTGACATATGCATATGCAACACAATTCTTTCCCAATTATTAAACCAAGATCTTCATATTACCAATATTGGAGTCCTAGACTCTCGCACTAAAAGTAAACTCAAGAAGAAGAGGGCTTTGATTGTACTGGATGATGTGGTTGATTCGCCAATTGCAACTGATTTGGTTCCAGGTTTGCGTACTTGCCTATGTTCTGGTAGCATCGTCATTTTGACAACAAGGGACAGGAATGTGCTTACAAGTGGAGGAGTTGAACAAATTCATGAAATCAAGCAAATGAATTATGGAGACTCCCATAAACTTTTTAACCATTATGCCTTTTCTGATTCCCATCCCAAAGCAGGGTATGCTGAGCTAACAGCTAGAGTCATAGATtatgctaatggcattccattggctttgaaaattttgggatcatttcttcgcggcaaaagtgtaggtgaatgggatagtgcattgaaaaaattaaggaagtatcccaatgcagatattcaaaaagcgttgaggttgagttatgatgcattagatgatgatgaaaaaaacatccttttagatgttgcatgctttttccacgggcataaaatggAGGAAATAACAAGAATATTAAATTCTTGTGTTTTCTTTGCAGACATAGGGATAAAAAGTCTATTGGATAAGTCTCTTATAAGTATTTATTCAAATGGTCGTTATAATAAATACATAAAAATGCATAGTTTGATACATGAAATGTGTTGGAAAATCATTCATGAAGAATATAGCAAAAATGGTGGTCAACAAACAAGACTATGGAATACCGAAGAAGTCTGCAATATTTTCCAAGATAAAAGAGATGTTCATGGAGTTGAAAGCATGACTGTGAATATGAATGAAATTACAATAGATCCACGTATAATCATCATTGCATTAAGGAAGATGCTAAAGTTAAGGTTACTTGCTTTAAGAGGAAATATCAACATGGATCTTGAAGGGAACAGAGTGTTTCTAGAGGATTTTCAACTTCCTAATGACTTAAGGTATATTGAGTGGAATAAATGCCCACTTAAGTTTGTGCCGTCTATTTGTTGGCCTCAAAAACTTGTTCAGCTTTCTATGCGAGATAGCAATGTTCAAAAACTTTGGGATACAGCACAGAATCTACCAAGTTTGGAGTTTATTGACCTCGAGCACTGTAAACGCTTGATAGAGTGCCCAAATTTAGCAGGTGCCACGAATCTCAAATTAATATCATTCTGTGGCTGTGAAAGCTTACAAGATGTTCATCCATCTATTTTCTCTCTCCCCAAGATTGAAAAACTATATGTGAGTTTTTGCACATCCCTAAAGAGGCTTTGCAGTGACTACTGTTCTCCCTCTCTTTGTGGCTTGTGGGCCACCGGTTGCTCCAATTTGGAAGTGTTCTCAATCCCCATTATGACTCATCATTCCAAAATCAAGTTACTTTTACCATCAACGGCTTTGACTGAAGTACCATCCACTATTATGCATCTCAAAAATCTTGAATGGTTTGCTTTTAACATCAGTTACTCTCTTCAAAAACTTCCTTTAAACTTTACCCCTAAAATTGGACTTATGGATCCAATAAAATATGAAGACGACACATGCATCATGTTAAGTAGAATATTCCCCACCCCTGCCTTTTTGTCTCTCAAGCAATTAATTTTCCACAAATGTAAGAGCTTGTCTGAACTCCCATACAACATTCATGTCTTACAATCATTACAAACATTAATATTGGATGGTTGTCATGTCATTACAAGTTTGCCAACAAGCATTAAGAATCTTCAACAGCTCTTTGAGCTTATGGTCGTTGATTGTGAAATGCTTCAATACATACCTCCACTTCCCCCATCTATTATATACTTTAATGCAGTAAGCTGTAAATCTTTGGAGGAAGTCTCAAGTTTAACCAGTGAACCATCCAGAGAACACTATGCATGGTTTGGATTCCATAACTGCACAAAGTTGGATGATGATGCATATGAAGCAGTTTTGAAAGACTTGAAATCCAGGATACAACTTGTGGCAAATAATGATGGATATTTGCATAATGGTAATAGATTCTGCTACTATTTACCAAGTAAAGAGAGCATAATTAATGAGTGGCTCCCTGACTACTACTCTAGAGAAGCTTCGATCATTGTTAAAGTTGCTCCAGATCACAAGATTTCTTCTTATCTTGTTGGCTGCATCTTGATTTCTCAATACCAATCTTGCAAGCTTGTCGAGAAAGAAGTGATATTTGGATGGAAATGCTACTTGGGAAAGGGTTGCAACGAGTGGGAATGGATCACAACTTCTGGCAATAGAGCACTACTCTCGACTGCTTATGTTGCGATTCCATTTGAAATGGTATCAGATCATAAGGTAGTATGGTATGATGGAGGTTCCAACGAGATAGCGGAAGCAATCAAAGAGAGAAGAAAAGGCACCACTTGCAATACTATGCTTAAATTTGAGTTCTATGCAAATACAGAAGATAATGAGGAAGTAGTGATAAAGGGGTGTGGGATCCATTGGATGCATGTCCATGTCAATCATGATGGAGAGATTAGTCCAGATGCCAGTGATGAGGGCTATGAATCTGATAGCTTGGAGTTGGAGGATGAATCCGATGACTTGGAGTTGGAAGATGAATCTGATGGCTTGGAGTTGGAGGACATTGAGAGTCAGAGAAAAGAGAACCGAATAAAGAGTGAATTTACGTGGTGGTTCCAAAGATTATTACTACTGTGTTGTAGAGCAAATATCGAAGAAGAGATATAG 3555 0.3111 MSLSVAAAASSSSQAPPTHRYDVFISFRGEDTRKGFLSHLQAAFRQNQIQTFRDDDGMDKGGLIWDELVDAIRNSNLFLVIFSKNYASSRWCLKELVEIMERKNNNNVVIPVFYRIEPTHVRKQSGSYRRAFDKHERSSEDRCHVQQWRTALTRAANLSGITFDDHRVDEAKLISEIVKAILPHCLKKKCFIDGLNRPFICNTNYTRVESLMRRKMEEVFVIGIWGMGGIGKSTIAEALFNNYSSQYEGSCFLSNSRELGKPCLIDICICNTILSQLLNQDLHITNIGVLDSRTKSKLKKKRALIVLDDVVDSPIATDLVPGLRTCLCSGSIVILTTRDRNVLTSGGVEQIHEIKQMNYGDSHKLFNHYAFSDSHPKAGYAELTARVIDYANGIPLALKILGSFLRGKSVGEWDSALKKLRKYPNADIQKALRLSYDALDDDEKNILLDVACFFHGHKMEEITRILNSCVFFADIGIKSLLDKSLISIYSNGRYNKYIKMHSLIHEMCWKIIHEEYSKNGGQQTRLWNTEEVCNIFQDKRDVHGVESMTVNMNEITIDPRIIIIALRKMLKLRLLALRGNINMDLEGNRVFLEDFQLPNDLRYIEWNKCPLKFVPSICWPQKLVQLSMRDSNVQKLWDTAQNLPSLEFIDLEHCKRLIECPNLAGATNLKLISFCGCESLQDVHPSIFSLPKIEKLYVSFCTSLKRLCSDYCSPSLCGLWATGCSNLEVFSIPIMTHHSKIKLLLPSTALTEVPSTIMHLKNLEWFAFNISYSLQKLPLNFTPKIGLMDPIKYEDDTCIMLSRIFPTPAFLSLKQLIFHKCKSLSELPYNIHVLQSLQTLILDGCHVITSLPTSIKNLQQLFELMVVDCEMLQYIPPLPPSIIYFNAVSCKSLEEVSSLTSEPSREHYAWFGFHNCTKLDDDAYEAVLKDLKSRIQLVANNDGYLHNGNRFCYYLPSKESIINEWLPDYYSREASIIVKVAPDHKISSYLVGCILISQYQSCKLVEKEVIFGWKCYLGKGCNEWEWITTSGNRALLSTAYVAIPFEMVSDHKVVWYDGGSNEIAEAIKERRKGTTCNTMLKFEFYANTEDNEEVVIKGCGIHWMHVHVNHDGEISPDASDEGYESDSLELEDESDDLELEDESDGLELEDIESQRKENRIKSEFTWWFQRLLLLCCRANIEEEI 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00646 1184 MobiDBLite consensus disorder prediction 1114 1145 - -
Aip09g00646 1184 Pfam NB-ARC domain 209 438 IPR002182 GO:0043531
Aip09g00646 1184 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 813 920 IPR044974 GO:0006952
Aip09g00646 1184 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 766 IPR044974 GO:0006952
Aip09g00646 1184 Pfam TIR domain 21 187 IPR000157 GO:0007165
Aip09g00646 1184 PRINTS Disease resistance protein signature 221 236 - -
Aip09g00646 1184 PRINTS Disease resistance protein signature 297 311 - -
Aip09g00646 1184 PRINTS Disease resistance protein signature 391 405 - -
Aip09g00646 1184 PRINTS Disease resistance protein signature 641 657 - -
Aip09g00646 1184 Gene3D - 357 440 IPR042197 -
Aip09g00646 1184 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 160 IPR035897 -
Aip09g00646 1184 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 813 920 - -
Aip09g00646 1184 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 766 - -
Aip09g00646 1184 SUPERFAMILY L domain-like 499 895 - -
Aip09g00646 1184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 449 IPR027417 -
Aip09g00646 1184 MobiDBLite consensus disorder prediction 1118 1145 - -
Aip09g00646 1184 Gene3D - 197 350 IPR027417 -
Aip09g00646 1184 Gene3D - 18 191 IPR035897 -
Aip09g00646 1184 SMART till_3 20 158 IPR000157 GO:0007165
Aip09g00646 1184 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Aip09g00646 1184 Gene3D Ribonuclease Inhibitor 715 904 IPR032675 -
Aip09g00646 1184 Gene3D Ribonuclease Inhibitor 542 714 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00646 Aip-Chr9 7587714 7594578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00646 208 919 WRKY Transcription Factor Family AT5G45050 29.292 5.47e-76 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00646 - - aip:107614877 1623.99