Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00645 ATGCTGTGGTTATCTTTTGCCAGGGATGATGAAGCTAAGTTAATTAGTGACATTTTAAAAGCAATTTTGCCACATTGTGTGAAGAACAAGTGCTTCATAGATGGACTCAACAGACCTTTTATTTGTAACACAAACTATACCCGCGTTGAATCTTTGATGAGACTCAAGATGGAGAAGGTTCTTGTGATTGGAATTTGGGGTATGGGCGGTATTGGTAAGTCAACCATTGCTGAGGCTCTCTTCAATAATTACTCTTTTCAATATGAAGGCTCTTGCTTCTTGTCAAATTCCAGAGAATTAGGAAAACCATGTCTCAGTGACATATGCAGCAGACTTCTTTCTCAATTATTAAACCAAGATCTTCATAATACCAATATTGGAGTACTAGACTCTCGCACTAAAAGTAAACTCGAGAAGAAGAGGGCTTTGATTGTACTGGATGATGTGGTTGATTCGCCAATTGCAACTGATTTGGTTCCAGGTTTGCGTACTTGCCTATGTTCTGGTAGCATTGTCATTTTGACAACAAGGGACAGGAGTGTGCTTACAAGTGGAGGAGTTGAACAAATTCATGAAATCAAGCAAATGAGTAATGGAGACTCCTATCAACTTTTTAGCCATTATGCCTTTTCTGATTCCCATCCCAAAGAGGGTTTGACACAGGAAATGTGTTGGAAAATCATTCATGAAGAATATAACAAAAATGGAGGTCAACAAATAAGACTGTTGAATACCACCGAAGAAATTTGCAATATTTTCCAAGATGAGAGAGATATTCATGGAGTTGAAAGCATGACGGTGGATATGAATCAAGTTACAATAGATCCACGTATAATCATCATTGCATTAAGGAAGATGCCAAAGTTAAGGTTACTTGCTTTAAGAGGAAATTTCAACATGGATCTTGAATGGAACACAGTGTTTCTAGAGGGTTTTCAACTTCCTAATGACTTAAGGTATATTGAGTGGAATAAATGTCCACTTAAGTTTGTGCAATCTATTTGTTGGCCTAAAAAACTTGTTCAGCTTTCTATGCGAGATAGCAATGTTGAAAAACTTTGGGATACACCACAGAATCTACCAAGTTTGGAGTTTCTTGACCTCTGTTGCTGCAAACACTTGATAGAGTGCCCAAATTTAGCAGGTGCCACGAATCTCAAATCAATAAAACTCGATGGCTGTAAAAGCTTACAAGATGTTGATCCATCTATTTTCTCTCTCCCCAAGATTGAAGAACTACACGTGAGCTATTGCACATCGCTAAAGAGGCTTTGCGGTGATTATTGTTCTCCCTCTCTCCATTGCTTGTGGGCCACTGGTTGCTCCAATTTGAAAGAGTTCTCAATCTCCATGATGGCTGATCATTCCAACCTCAGGTTACTTTTACCGTCAACGGCTTTGAGTGAAGTGCCATCCACTATTATGCATCTCAAAGATCTTGAGTGGTTCAGTTTTAACATCAGTTACTCTCTTGAGAAGCTTCCTCAAAACTTTGCCTCCATAATTGCGCTCACGGATCCAATAAAACATGAAGATGACACATGCATCATGTTAAGAAGAATATTGCCCACCCCTGCCTTCTTGTCTCTCAAGGAATTAGTTTTCTACAGATGTAAGAGATGTAAGAGGTTGTCTGAACTCCCAGACAACATTCATGTCTTACAATCATTACAAGTATTAGCATTGGATGACTGTCATGTCATTAAAAGTTTGCCAACAAGCATTAAGAATCTTCAACAGCTCATAGAACTTTGGATTGCTAATTGTGAAATGCTTCAATACGTACCTCCACTTCCCCCATCTATTATATACTTTAAAGCACTAAACTGCAAATCTTTGGAGACACTCTCAAGTTTAACCAGTGAACCACCTAGACAACACAATGCATGGTTTGGATTCCATAACTGCACAATGTTGGATGATGATGCATATGAAGCAGTTTTGAAAGACTTGAAATCCAGGATAGAACTTGTGGCAAATAATGATGGATATCCGCATAATGAAGCAAACAACGGTAATACATTCTTGTACTACTATTTACCAAGTAAAGAGAGCATAACTAATGAGTGGTTCCCTGACTACTACTCAAGAGAAGCTTCGATCATTGTTGAAGTTGCTCCAGATCACAAGATTTCTTCTTGTCTTGTTGGCTGCATCTTGATTTCTCAATACCAATCTTTCAACTTTGGCGTCAAAAAAGTGATATTTGGATGGAAATGCTACTTGAGAAAGGGTTGCAATGACTGGGAGATAATATTCATATAA 2265 0.3832 MLWLSFARDDEAKLISDILKAILPHCVKNKCFIDGLNRPFICNTNYTRVESLMRLKMEKVLVIGIWGMGGIGKSTIAEALFNNYSFQYEGSCFLSNSRELGKPCLSDICSRLLSQLLNQDLHNTNIGVLDSRTKSKLEKKRALIVLDDVVDSPIATDLVPGLRTCLCSGSIVILTTRDRSVLTSGGVEQIHEIKQMSNGDSYQLFSHYAFSDSHPKEGLTQEMCWKIIHEEYNKNGGQQIRLLNTTEEICNIFQDERDIHGVESMTVDMNQVTIDPRIIIIALRKMPKLRLLALRGNFNMDLEWNTVFLEGFQLPNDLRYIEWNKCPLKFVQSICWPKKLVQLSMRDSNVEKLWDTPQNLPSLEFLDLCCCKHLIECPNLAGATNLKSIKLDGCKSLQDVDPSIFSLPKIEELHVSYCTSLKRLCGDYCSPSLHCLWATGCSNLKEFSISMMADHSNLRLLLPSTALSEVPSTIMHLKDLEWFSFNISYSLEKLPQNFASIIALTDPIKHEDDTCIMLRRILPTPAFLSLKELVFYRCKRCKRLSELPDNIHVLQSLQVLALDDCHVIKSLPTSIKNLQQLIELWIANCEMLQYVPPLPPSIIYFKALNCKSLETLSSLTSEPPRQHNAWFGFHNCTMLDDDAYEAVLKDLKSRIELVANNDGYPHNEANNGNTFLYYYLPSKESITNEWFPDYYSREASIIVEVAPDHKISSCLVGCILISQYQSFNFGVKKVIFGWKCYLRKGCNDWEIIFI 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00645 754 Gene3D Ribonuclease Inhibitor 195 507 IPR032675 -
Aip09g00645 754 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 219 741 IPR044974 GO:0006952
Aip09g00645 754 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 212 IPR044974 GO:0006952
Aip09g00645 754 Gene3D - 40 189 IPR027417 -
Aip09g00645 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 227 IPR027417 -
Aip09g00645 754 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 212 - -
Aip09g00645 754 PRINTS Disease resistance protein signature 136 150 - -
Aip09g00645 754 PRINTS Disease resistance protein signature 62 77 - -
Aip09g00645 754 PRINTS Disease resistance protein signature 358 374 - -
Aip09g00645 754 Pfam NB-ARC domain 51 229 IPR002182 GO:0043531
Aip09g00645 754 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 219 741 - -
Aip09g00645 754 Gene3D Ribonuclease Inhibitor 513 639 IPR032675 -
Aip09g00645 754 SUPERFAMILY L domain-like 279 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00645 Aip-Chr9 7575719 7580452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00645 244 636 WRKY Transcription Factor Family AT5G45050 26.448 6.35e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00645 - - aip:107614877 879.782