Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00638 ATGAACAACTACTCAAGAATGTTGCTACTCATTTGGTTTTCTCTCATATCTTGCTTTAAAACCACCACTTCAAAAGATAGCTTAAGAATGAGTGAGTATATTCGAGATGGCGAGACTTTAGTCTCGGCAGGTGGAAGCTTTGAAGTGGGTTTCTTCAGCCCCGGAGCTTCGACTCGCCGGTACTTGGGCTTGTGGTATAGAGATGCATCAAGAAACAACACAATTTTGTGGGTGGCCAATAGAGAAAGACCCCTTCACAATAAGTCAGGTGTTTTGATATTCAAAGAAACAGGGGATCTTCAACTTCTTAGTGACACAAACAACACCATTTGGTCATCCAACATCTCAAGCAAAGCCTTGAGTAACTCGGTTGCACAGCTCTTGGATTCAGGGAATCTTGTGGTGAAAAATGTACCAGATACTAAGGAGGGAAGCTTTTTGTGGCAGAGTTTTGATTATCCATGCGATACATATATTCCAGGGATGAAATTCGGCCGGGACTTAGCTACCGGCCTAGACAGATCGCTTTCGTGCTGGAAAAGTACAGAGGATCCTGCTGTAGGAGAATATTCTCTAAGAGTTGATCCTAGGGGATATCCACAGGTAATGCAAATGAAGGGTTCTGTTATAATTAGTAGAATAGGATCATGGAATGGCATTTATTTTACTGGAACTCCAGTTGAAGGCATGAGCATACTTAAGCGTAATTTCGTGTTGAATTCGAAAGAAGTGTATTTTGAGTTTGAAATACTTGATAGGTCCATCTTCTCCATACTCAAAACAAACCCTTCTGGAGATGCACAAGTTATGACTTGGACAAGTCAAACAACGAGCCGGGTTGAAGTTTCCCTAACCGGCGGGCAGTATGCCTGTGGAAGTTATGCCTTGTGTGGTTCAAATTCCGTATGTAGCATGGCTGCTGATGTTGCAACATGCGATTGCGTAAAAGGATACACTCCAAAGTTTCCTGAAAAATGGTACATCTCAGATTGGTCTAGTGGGTGTTCTAGAAAAGATGCATTGGATTGTGATGATGTAGTAGGGTTCTTGAAGTACAGTGACATGAAATTGCCAGACACATCTTCCTCATGGTATAGTGAGACAATGAACCTTGAAGAATGTCAGAAGTTATGTCTCAAAAATTGTTCTTGTACAGCATATGCAAATTTGGATATCCGCAATGGAGGAAGTGGTTGCTTACTTTGGTTTGGTAATCTTACTGACATGATGCAATTCTCAAAAGGGGGTCAAGACCTTTACATCAAAGTCCCTGCTTCAGAATTAGGTACTTTTCCTTGTGTTCATTTTCCTTTTCCATTCTTTTTCATTGTTGTCCTCCAACCAGCAAGAATACTTAACAGACATAAGCAAAGACAAGAAGATATCAACCTACCAAAATTTGATTTCTCACTCTTAGCCAAAGCTACTGAAAACTTCTCAAGCAATAATAAACTTGGAGAAGGTGGTTTTGGACCGGTATACAAGGGTAAGATGATAGATGGCCAAGAGATAGCTGTGAAAAGACTTTCTAAAAAATCTGGACAAGGGTCGGAAGAGTTCAAGAATGAAGTGATGTTGATAGCTAAACTTCAGCATCGTAATCTCGTGAAGCTTCTTGGCTACTGCATTCAAGGGGAAGAAAAAATATTAATCTATGAGTATATGCCTAACAAAAGCTTGGACTACTTTGTTTTTGATGAAATTAGAAGGAAGTTGCTAGATTGGCCTAAACGTTTCAACATTATTAGCGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGAATTATTCATAGAGATCTAAAAACCAGCAACATTTTGCTGGATGCAAATTTGAATCCTAAAATATCAGACTTTGGCTTGGCACGAACATTCTTAGGCGATCAAGTGGAGGCTAACACAAACAGGATAGCTGGAACATATGGTTATATGCCTCCTGAGTATGCAGTACATGGGCAATTCTCAATGAAGTCCGATGTGTTTAGCTATGGTGTGATAGTACTAGAGTTGTTAAGTGGAAAGAAGAACAGGGAATTCTCCGACCCGGAAAACTACCTTAATCTTCTTGGACATGCATGGAGATTATGGACTGATGACAGACCATTGGAGCTATTGGATGAATTGTTAAAGGGATGCACCCATTCTGAAGTCATAAGATGCATACAAGTGGGCCTATTATGCGTGCAACAAAGACCAGAAGACCGACCAGACATGTTATCTGTGGTCCTAATGCTAAATGGTGAGAAATTGTTGCCCAAGCCAAAGGTCCCTGGTTTTTATATTGAAAGAGGTGTTACAATTGAAGCAGACACTGTGTTGGGAAACAGCACACCGTTTTCAGCCAACGAAATTTCCATGACATTGTTAAATGCAAGATAG 2391 0.404 MNNYSRMLLLIWFSLISCFKTTTSKDSLRMSEYIRDGETLVSAGGSFEVGFFSPGASTRRYLGLWYRDASRNNTILWVANRERPLHNKSGVLIFKETGDLQLLSDTNNTIWSSNISSKALSNSVAQLLDSGNLVVKNVPDTKEGSFLWQSFDYPCDTYIPGMKFGRDLATGLDRSLSCWKSTEDPAVGEYSLRVDPRGYPQVMQMKGSVIISRIGSWNGIYFTGTPVEGMSILKRNFVLNSKEVYFEFEILDRSIFSILKTNPSGDAQVMTWTSQTTSRVEVSLTGGQYACGSYALCGSNSVCSMAADVATCDCVKGYTPKFPEKWYISDWSSGCSRKDALDCDDVVGFLKYSDMKLPDTSSSWYSETMNLEECQKLCLKNCSCTAYANLDIRNGGSGCLLWFGNLTDMMQFSKGGQDLYIKVPASELGTFPCVHFPFPFFFIVVLQPARILNRHKQRQEDINLPKFDFSLLAKATENFSSNNKLGEGGFGPVYKGKMIDGQEIAVKRLSKKSGQGSEEFKNEVMLIAKLQHRNLVKLLGYCIQGEEKILIYEYMPNKSLDYFVFDEIRRKLLDWPKRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLNPKISDFGLARTFLGDQVEANTNRIAGTYGYMPPEYAVHGQFSMKSDVFSYGVIVLELLSGKKNREFSDPENYLNLLGHAWRLWTDDRPLELLDELLKGCTHSEVIRCIQVGLLCVQQRPEDRPDMLSVVLMLNGEKLLPKPKVPGFYIERGVTIEADTVLGNSTPFSANEISMTLLNAR 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00638 796 CDD PAN_AP_plant 341 424 - -
Aip09g00638 796 SUPERFAMILY Protein kinase-like (PK-like) 460 749 IPR011009 -
Aip09g00638 796 Pfam D-mannose binding lectin 74 180 IPR001480 -
Aip09g00638 796 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Aip09g00638 796 Gene3D Transferase(Phosphotransferase) domain 1 555 755 - -
Aip09g00638 796 Gene3D Hepatocyte Growth Factor 340 420 - -
Aip09g00638 796 Gene3D Phosphorylase Kinase; domain 1 452 554 - -
Aip09g00638 796 ProSiteProfiles Protein kinase domain profile. 479 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00638 796 SMART blect_4 31 154 IPR001480 -
Aip09g00638 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Aip09g00638 796 ProSiteProfiles PAN/Apple domain profile. 343 425 IPR003609 -
Aip09g00638 796 PIRSF SRK 445 796 IPR024171 GO:0004674
Aip09g00638 796 PIRSF SRK 1 435 IPR024171 GO:0004674
Aip09g00638 796 SMART serkin_6 479 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00638 796 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Aip09g00638 796 Pfam Protein tyrosine and serine/threonine kinase 482 720 IPR001245 GO:0004672|GO:0006468
Aip09g00638 796 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Aip09g00638 796 SMART ntp_6 344 423 IPR003609 -
Aip09g00638 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 185 IPR036426 -
Aip09g00638 796 CDD B_lectin 31 154 IPR001480 -
Aip09g00638 796 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 454 793 - -
Aip09g00638 796 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 428 - -
Aip09g00638 796 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 454 793 - -
Aip09g00638 796 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 21 428 - -
Aip09g00638 796 Gene3D - 20 151 IPR036426 -
Aip09g00638 796 CDD STKc_IRAK 485 751 - -
Aip09g00638 796 Pfam PAN-like domain 346 409 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00638 Aip-Chr9 7473229 7483257 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00638 466 796 Receptor kinase-like Gene Family AT4G05200 54.971 2.40e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip09g00638 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00638 - - aip:107614884 1382.47