Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00635 ATGCTGCTTATTTCATTACTTCTCATGTCCTGCATGAGAACAATCACTTCAAGAGACAGTTTAGAAGTAGGTCAATCTATCCAAGATGGTGAGACTTTGGTTTCTTCTGGTGGAAGCTTTGAATTGGGTTTCTTTAGTCCTGGGATTCCAACAAATAGATACTTAGGTGTGTGGTACAGAGATGCATCAGGGAATTCAACAGTTGTGTGGGTGGCAAACAGAGAGATACCAATTCAAAGTAACTCATCAGGTGTTTTGAGACTAAGCAAGAAGGGGATTCTACAGCTTCTGAATGGCACTAACAGCACCATTTGGTCTTCCAACACCTCAGGCAACACTTTGGGGAGCTCAATTGCACAACTCTTGGATTCGGGAAATCTTGTAGTGAAAAATGGACAAAGCACATCGGAGAAAAACTTTTTATGGCAGAGTTTTGATTATCCATGTGATACACTGATGCCAGGAATGAAGCTTGGATTGAACTTAGTTACTGGTTTTGACATATCTATGTCATCTTGGAAAAGTGCAGAGGATCCTGCTGTAGGAGAATATTCTATAAAGTTTGATCCTAGAGGATATCCACAATTAATACAATGGAAAGGATCTGTTAAATATTTCCGAACAGGGACATTTAATGGCCTTTATTTCACTGGATATCCAACCCAGGAAGATGAATATAGACAGGATTTTGTATTGGACAAAACCGAGGTGTGTTGGAAGTTTGAAATACTAGACAGATCAATTTTCTACCTGTATAAACTACAACCTTCAGTTACTTCAATAGGTACTATTTGGAAAAATCAAACAAGAACTGAGTTGGAACTTGCCACAATTGATGGATACAATGGGTGTGGAAGTTATGCCTTTTGCGGTTCAAATGCTATATGCAAGGTTGATGCTAACCTTGCATCATGTGAATGCCTAAAAGGATATGTTCCCAAGTTTCCCCAACAATGGAATATGTCAAATTGGTCTGATGGTTGTGTTAGGAAGACTTCACTGGATTGTAATAACACTAATAGCTTCTTAAGGTACACAGATATAAAAGTGCCAGACACTTCATCCTCATGGTATAACAAGACCATGAATCTCAAGGAATGTGAAAACATTTGCCTAAAAAACTGTTCTTGTGTTGCTTATGCAAATTTGGATATCCGTAATGGAGGAAGTGGTTGCCTACTTTGGTTTAATCATCTTATTGACATGGTTCAATACTCAAGAGCTGGTCAAGATATTTATATCAAAGTCCCTACTTCGGAATTAGGTAATGACCACGGAAATTTGAAGAAAAAGAAGGTGCGAATTGCAGTTGGTGTGATTATTTTCGGATTAATCACTTGTGTTAGCATAGTGATAATAAAAAAATCAGGAGTTGCAAGAATAATTCAAAGAAATAGGCAAAGACAGGTCACTGAGCTACCAACATTTGATTTCTCGGTCTTAGTTAAAGCAACAGAGAACTTTTCAAGTAGTAACAAACTTGGAGAAGGTGGTTTTGGATCAGTATACAAGGGCACACTAACAAATGGTCAAGAGTTAGCTGTGAAAAGGCTTTCAAAAAAGTCTAAACAAGGTTTAGAAGAGTTTAAAAATGAAGTGGCATTGATAGCCAAACTTCAACATCGTAATCTTGTAAAGCTTCTTGGATGTTGCATTCAAGGAGTAGAAAAAATATTGATTTATGAATACATGCCAAACAAAAGCTTAGACTACTTTGTTTTTGATGAAATCAGAAAGAAGATGCTAGATTGGCTTAAGCGTTTCAACATTATCAGTGGCATTGCTCGGGGACTTCTTTATCTTCATCAAGATTCTAGACTGAGGATTATTCATAGAGACCTAAAAACTAGCAATATTCTGTTAGATGCAAATTTGAATCCTAAAATATCAGACTTTGGCCTAGCTCGGACATTCTTAGGCGATCAGCTCGAGGCTAACACGAACAGGGTAGCTGGAACATATGGTTATATGCCTCCCGAGTATGCAGTACATGGACAATATTCAATGAAGTCCGATGTTTTTAGCTATGGTGTCATACTACTAGAGTTGATAAGTGGGAAGAAGAATAGAGAATTTTCAGATCCAGAAAACTACCTTAACCTTCTTGGACATGCATGGAGATTATGGACTGATGAGAAGCCATTGGAACTGCTAGATGAAGTGTTAAAGGAAGGATGCACACCACTTGAAGTAAAAAGATGCATTCAAGTGGGCCTCTTATGTGTGCAACAAAGACCAGAAGATAGGCCAGACATGTCTTCAGTGGTTCTAATGTTGAATGGTGAGAAATTACTGCCCAAGCCAAAGGTTCCTGGTTTTTATACTGAAAGAGGTGTTACACTTGAAGCAGATTCTTTGATGGAAAATCACACATTGTTTTCAGCCAATGAAATCTCCATCACAACATTATATGCAAGATAG 2421 0.3792 MLLISLLLMSCMRTITSRDSLEVGQSIQDGETLVSSGGSFELGFFSPGIPTNRYLGVWYRDASGNSTVVWVANREIPIQSNSSGVLRLSKKGILQLLNGTNSTIWSSNTSGNTLGSSIAQLLDSGNLVVKNGQSTSEKNFLWQSFDYPCDTLMPGMKLGLNLVTGFDISMSSWKSAEDPAVGEYSIKFDPRGYPQLIQWKGSVKYFRTGTFNGLYFTGYPTQEDEYRQDFVLDKTEVCWKFEILDRSIFYLYKLQPSVTSIGTIWKNQTRTELELATIDGYNGCGSYAFCGSNAICKVDANLASCECLKGYVPKFPQQWNMSNWSDGCVRKTSLDCNNTNSFLRYTDIKVPDTSSSWYNKTMNLKECENICLKNCSCVAYANLDIRNGGSGCLLWFNHLIDMVQYSRAGQDIYIKVPTSELGNDHGNLKKKKVRIAVGVIIFGLITCVSIVIIKKSGVARIIQRNRQRQVTELPTFDFSVLVKATENFSSSNKLGEGGFGSVYKGTLTNGQELAVKRLSKKSKQGLEEFKNEVALIAKLQHRNLVKLLGCCIQGVEKILIYEYMPNKSLDYFVFDEIRKKMLDWLKRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLNPKISDFGLARTFLGDQLEANTNRVAGTYGYMPPEYAVHGQYSMKSDVFSYGVILLELISGKKNREFSDPENYLNLLGHAWRLWTDEKPLELLDEVLKEGCTPLEVKRCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKLLPKPKVPGFYTERGVTLEADSLMENHTLFSANEISITTLYAR 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00635 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Aip09g00635 806 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 803 - -
Aip09g00635 806 Pfam PAN-like domain 336 402 IPR003609 -
Aip09g00635 806 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 15 803 - -
Aip09g00635 806 PIRSF SRK 1 806 IPR024171 GO:0004674
Aip09g00635 806 SMART ntp_6 337 416 IPR003609 -
Aip09g00635 806 Pfam Protein tyrosine and serine/threonine kinase 491 757 IPR001245 GO:0004672|GO:0006468
Aip09g00635 806 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Aip09g00635 806 ProSiteProfiles Protein kinase domain profile. 488 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00635 806 Pfam D-mannose binding lectin 67 174 IPR001480 -
Aip09g00635 806 SMART serkin_6 488 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00635 806 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
Aip09g00635 806 CDD B_lectin 25 148 IPR001480 -
Aip09g00635 806 CDD PAN_AP_plant 332 417 - -
Aip09g00635 806 Gene3D - 13 145 IPR036426 -
Aip09g00635 806 Gene3D Hepatocyte Growth Factor 333 414 - -
Aip09g00635 806 SUPERFAMILY Protein kinase-like (PK-like) 470 759 IPR011009 -
Aip09g00635 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 213 IPR036426 -
Aip09g00635 806 SMART blect_4 24 148 IPR001480 -
Aip09g00635 806 CDD STKc_IRAK 494 761 - -
Aip09g00635 806 Gene3D Transferase(Phosphotransferase) domain 1 564 765 - -
Aip09g00635 806 Gene3D Phosphorylase Kinase; domain 1 453 563 - -
Aip09g00635 806 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Aip09g00635 806 ProSiteProfiles Bulb-type lectin domain profile. 18 142 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00635 Aip-Chr9 7453246 7456405 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00635 476 806 Receptor kinase-like Gene Family AT4G23140 57.018 3.54e-131 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip09g00635 PK_Tyr_Ser-Thr 6.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00635 - - aip:107614884 1187.17