Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00634 ATGATAACTGTCACATCAACAGACAGTTTAGCAATGAGTCAATGTATTCGAGATGGCGAAACGTTAATCTCGGCCGGCCGAAATTTTGAGCTGGGTTTCTTTAGCCCCGGAATTTCAACAAGTCGATATTTGGGTGTGTGGTACAGAGCTTCATCAGGGAATGCAACAATTGTGTGGGTGGCAAACAGAGAAAACCCCCTTCACAACAAGTTAGGAACTTTAAGGTTAAACAACAAGGGGATTCTTGAGCTTCTTAGTAACACAAATAAAACCATTTGGTCATCCAACATCATAGCAAGCAAAACCAAAGCCACGAGTAGCTCAATTGTACAACTCTTGGATACAGGAAATCTTGTAGTGAAAAATGGACAAGATACTAATAATGAGGACAATCCTTTGTGGCAAAGTTTTGATTATCCTGGCGACACATTGATGCCAGGAATGAAGGTTGGATTGAACTTTGTTACTGGGAAGAATGCATCTCAATCATGCTGGAAAAGCGACGAGGATCCTGCTGTGGGAGAATATTCTCTAAAATTTGATCCTAGAGGATATCCACAATTGATGCAGATGAAAAGATCTGCAATAAGTATCAGACGAGGGTCATGGAATGGCCGTTATTTTACTGGATCTCCAGCTGAGGACATGCATGAATTTAAAACTGATTTTGTGTTCAACAAAGAAGAGGTCTATTATGAGTTTGAAATTCTTGATAGATCAATCTTCTCTGTATTCAAAATGGACCCTTCTGGGAATACACAAATTATGGTTTGGGAAATTCAAACAAGAATTCCAGTGGAAGTTTCCATGATCAATGGACCAAATGCATGTAAAAGTTATGCATTTTGTGGTCAAAATTCTTGGTGCTTTATGGATGGCAATTTTGCTGTATGCCAATGCATGAAAGGTTATACTCCCAAGTTTCCTGAACAATGGAATACATCACAGTGGTCTGGTGGTTGTGTTAGAAAGACTCCATTGAAGTGTAATGATACAAATGGATTCTTCATGTATGAGTACATGAAAATGCCGGACACATCTTCTTCATGGTTTAGCGAGACCATGAACCTCGAGGAATGTGGAAAATCATGCCTGGAAAATTGTTCATGTGTTGCATATGCAAGTTTGGATATCCGAAATGGAGGAACTGGTTGTCTACTTTGGTTTGATTATCTTGTTGATGTGATGCAATTTTTTAAGGCCGGTCAAGATCTTTATATTAAAGTCCCTGCATCAGAATTAGATATTTACCATGGACACAACAAGAAAATTAAAGTGGGAATTGCAGCTGGTGTCATTGTCTTCGGATTAATCACAATTGTCAGCATAATGATAATTACAAAACCAGGGGCAACAAGGATATTATGCAGAAGGTGGCAACGACGAGAAAACATTGATCTACCAACATTTGATTTCTCAATCCTAGCTAAAGCTACAGAAAACTTTTCAAGTTGCAACAAACTTGGAGAGGGTGGTTTTGGACCAGTATACAAGGGCACATTGTCAGATGGTCAACATTTAGCTGTGAAAAGGCTTTCAAAAAAGTCTACACAAGGATTGGAGGAGTTTAAAAATGAAGTGGTATTGATAGCCAAACTTCAACATCGCAATCTTGTGAAACTTCTTGGTTGTTGCATTCAAGGAGCAGAAAAAATATTAATCTATGAATACATGCCTAACAAAAGCTTGGACTACTTTGTTTTTGATGAAATAAGGAGGAAGCTACTCAATTGGCATAAGCGTTTCGACATTATTAGTGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGACTAAGGATTATTCACAGAGATCTAAAAACCAGCAATATTTTATTAGATGCAAATATGAATCCAAAAATATCAGACTTTGGTCTAGCAAGAACATTCTTAGGAGACCAAGCAGAGGATAAGACAGACAGAGTAGTTGGAACATATGGCTATATGCCTCCGGAGTATGTAGTGCACGGACAATTCTCAATGAAGTCAGATGTTTTTAGCTATGGTGCGATTGTATTAGAGTTGATAAGTGGGAAGAAAAATAGACAGTTCTCAGATCCAGAACACAACCTTAATCTTCTTGGGCATGCTTGGAGATTATGGTCTAATGAGAGGCCATTGGAACTATTAGATGAAGTATTAAAGGAAGGATGCACCCGTTCTGAAGTCATACGATGCATACAAGTGGGTCTGTTATGTGTGCAGCAAAGACCAGCAGATAGACCAAACATGTCATCAGTGGTTCTAATGCTAAATGGTGAGAAATTGTTGCCCAAGCCAAAAGTTCCCGGTTTTTATAATGACAGAAGTGTTACACTTGAAACAGATTCTTTGTTGAAAAATTACACATCATTTTCAACCAATGAAATTTCTAACACTATGTTAGATGCAAGATAG 2403 0.3824 MITVTSTDSLAMSQCIRDGETLISAGRNFELGFFSPGISTSRYLGVWYRASSGNATIVWVANRENPLHNKLGTLRLNNKGILELLSNTNKTIWSSNIIASKTKATSSSIVQLLDTGNLVVKNGQDTNNEDNPLWQSFDYPGDTLMPGMKVGLNFVTGKNASQSCWKSDEDPAVGEYSLKFDPRGYPQLMQMKRSAISIRRGSWNGRYFTGSPAEDMHEFKTDFVFNKEEVYYEFEILDRSIFSVFKMDPSGNTQIMVWEIQTRIPVEVSMINGPNACKSYAFCGQNSWCFMDGNFAVCQCMKGYTPKFPEQWNTSQWSGGCVRKTPLKCNDTNGFFMYEYMKMPDTSSSWFSETMNLEECGKSCLENCSCVAYASLDIRNGGTGCLLWFDYLVDVMQFFKAGQDLYIKVPASELDIYHGHNKKIKVGIAAGVIVFGLITIVSIMIITKPGATRILCRRWQRRENIDLPTFDFSILAKATENFSSCNKLGEGGFGPVYKGTLSDGQHLAVKRLSKKSTQGLEEFKNEVVLIAKLQHRNLVKLLGCCIQGAEKILIYEYMPNKSLDYFVFDEIRRKLLNWHKRFDIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANMNPKISDFGLARTFLGDQAEDKTDRVVGTYGYMPPEYVVHGQFSMKSDVFSYGAIVLELISGKKNRQFSDPEHNLNLLGHAWRLWSNERPLELLDEVLKEGCTRSEVIRCIQVGLLCVQQRPADRPNMSSVVLMLNGEKLLPKPKVPGFYNDRSVTLETDSLLKNYTSFSTNEISNTMLDAR 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00634 800 SMART ntp_6 330 409 IPR003609 -
Aip09g00634 800 ProSiteProfiles PAN/Apple domain profile. 329 411 IPR003609 -
Aip09g00634 800 SUPERFAMILY Protein kinase-like (PK-like) 467 768 IPR011009 -
Aip09g00634 800 PIRSF SRK 1 800 IPR024171 GO:0004674
Aip09g00634 800 Pfam Protein tyrosine and serine/threonine kinase 485 751 IPR001245 GO:0004672|GO:0006468
Aip09g00634 800 Pfam PAN-like domain 329 395 IPR003609 -
Aip09g00634 800 CDD STKc_IRAK 488 755 - -
Aip09g00634 800 Gene3D Hepatocyte Growth Factor 326 406 - -
Aip09g00634 800 Gene3D - 2 137 IPR036426 -
Aip09g00634 800 Gene3D Phosphorylase Kinase; domain 1 454 557 - -
Aip09g00634 800 CDD PAN_AP_plant 325 410 - -
Aip09g00634 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Aip09g00634 800 Gene3D Transferase(Phosphotransferase) domain 1 558 760 - -
Aip09g00634 800 CDD B_lectin 16 140 IPR001480 -
Aip09g00634 800 Pfam S-locus glycoprotein domain 199 308 IPR000858 GO:0048544
Aip09g00634 800 SMART serkin_6 482 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00634 800 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 797 - -
Aip09g00634 800 ProSiteProfiles Protein kinase domain profile. 482 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00634 800 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 797 - -
Aip09g00634 800 ProSiteProfiles Bulb-type lectin domain profile. 7 133 IPR001480 -
Aip09g00634 800 SMART blect_4 13 140 IPR001480 -
Aip09g00634 800 Pfam D-mannose binding lectin 56 166 IPR001480 -
Aip09g00634 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 171 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00634 Aip-Chr9 7447891 7451256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00634 470 767 Receptor kinase-like Gene Family AT4G23230 60.535 9.92e-129 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip09g00634 PK_Tyr_Ser-Thr 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00634 - - aip:107614885 1639.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00634 09 7447891 7451256 Aip09g00634 09 7447891 7451256 ECH