Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00617 ATGGCAAAAGATGATGATGAAATGCCTAAGATCCTTCATGGAACAATTGAAGCTACCATCTTCAATGCCTCATCACCTCCCTCTTCTTCTTCATTTCCCTTCAAGTGTCTATGTTTAAAAGCAGAAAAACCAGCTTATGTGACAATCAAGATAGACAAGAACAAGGTTGCAAAAACAATTGAAGACATTGATCGTGTATGGAACCAAACCTTCAAGATCCAATGTGCATACCCAATTGATTCAACAATCACAATAACACTCAAAACAAAAACTTGCACATTAGGAAAGTACCACATAAAAGGCCAAAAGCTTCTAGAAGAAGGAGGCTTAATCAATGGATTCATCCCTCTACTAATGGAAGATAATAATGGGAAAAGACCAAACCAACAAAAACTCAAATTGAAGTTCCAATTGTGGTTCAATTCAGCTGAAGAATTATTGGAACCAATAAGTTGGGCAAAGATAATGAGGTTTGGGAATTCTTGTCAAGGAATGAGAGATTCTTGTACTACATTTCCACAAAGGTCTAATTGTTATGTGAAACTATATCATGATGCTCATCATTGTTCTACTTTTCAACCAAATATTGGTTTATTATGTGAAGCTCCAAGGAAGCTATGGGAGGATGTGTATAAAGCTATTGAGGGTGCAAAGCATATAATTTATATTGCAGCCTGGTCCCTCAATCCAAACTTGGTTCTGGTTAGAGATCCTCAAACAGAAATCCCACATGCCAAAGGAATAAAGCTTGGTGATTTATTGAAGAAGAAAGCAGAGGAAGGTGTTGCTGTGAGGATTATGCTTTGGGATGATGAAAAATCTTTGCCCTTTATTAAGAAGAACAAAGGTGTAATAACAAACAGTAATAATACACAACATCATGATGATGATGATGATGATGATAATGATGATGCTTTTGCTTACTTCAAGAAAACAAGAGTAATATGCACAAAATGTCCTAGGTTGCACCACAAATTCCCAACACTCTTTTCTCACCACCAAAAGACTATAACATTGGACACAAAATCACCAAATAATTCTAGTGATGATGATGGTGAAGATGAGAGAGAACTAATGAGCTTTTTGGGAGGATTAGATTTGTGTGAAGGAAGATATGACACTGAGCAACATTCATTGTTTCACACACTGATTAGGGAATCACATTGTTATGATTTTTACCAACCAAACATTGGAGGAGCTAGTCTTAACAAAGGAGGGCCAAGAACACCTTGGCATGATGCTCATGCTTGTGTTATTGGTGAGGCTGCTTGGGATGTGTTGACCAACTTTGACCAAAGGTGGAGAAAGCAATGTGATTCTTCTTTTCTTGTTCCTACTACCACCATTGCAAATGTTCTTGGGCCAAGGAATAGCACAACTTCAAACACCTCCATAGACAAGGATTGGAATTGGAAAGTTCAAGTATACAGGTCAATTGATGATGTGTCAGCTAGCTTCCAAAGCCAATCATTTAGAGAGTTACATGTAGAAAGGAGCATCCATGAGGCTTATGTTGAAGCAATAAGAAGTGCTGAAAAGTTTATATACATTGAGAATGAATATTTCATTGGAGGGTGCCAATTATGGGACAAAGATAGGGATAGTGGATGCACAAACCTAATCCCAATTGAAATTGCACTCAAAATTGTTAGCAAGATCAAAGCAAAAGAGAGGTTTGCAGTGTACATAGTGATACCAATGTGGTCAGAGGGAGTGCCTAAAAGTGAAGCAGTTCAAGATATATTGCATTGGACTAGAGAAACTATGACTATGATGTATAGGTTAATTGGAGAAGCATTGAAGGAGAATGGGGAAAATAATAATAATGGTCACCCTAAAGATTATTTGAATTTCTTTTGCCTTGCAAATAGGGAACAAAAGGGGAGTGGGGAGTATATTCCACAACATGCTCCTCATCCTGGAACACTTTATGGGAGTGCACAAAGTAATAGGAGGTTCATGGTTTATGTTCACTCCAAGTTCATGATAGTGGACGATGAATACATACTAATAGGATCAGCAAATGTGAACCAAAGATCCATGGATGGAGAAAGGGACACTGAGATTGCCATAGGATGCTACCAATTATCTCAAGATAATAAACATGAAGGTATGAGGCATGGTGAGATTCATGCATTTAGAATGTCACTATGGTATGAACACACTGCTAGTAGTGCCAATTATGACTTGTTCTTGGAGCCACAAAGCTTGGAATGTGTCAACATTATGCGTTCAATTGGTGACAAAATGTGGCACATTTACATCAATGATGAAATTGTGGACATGGAAGGTGTGCACCTTGTGACTTACCCTATAAGTGTGACACAAGATGGAGACCTCGCGATGATGTCCGGAGACCGGCACGGCAGGCATGCGGTCAGCGCGCCCGTAGGGCCTCAGCACGGTGACGGAGACCAGCAGTTGTCGGACGAGGATGCTGAGTATGCACGACAGGAGGATATACCTGAGAGAGACGATACCGACATACCTGTGACATCGAGCGGTGTGTCCACCCAACATGGTTCAGCTCCTCCAGGGTGTTACCAGACTCCTCCTCCACCACCGCACCAGTCTAGTTCTGCTCCGTCACCCTACTATCAGACTCCATCCCTGCCACCACAGCCACCTCTGTCCGGTTCTATTTGGTCACCACCTCCTATGTCTCCTCCCATGATTGTAGCAGTTCCTCCTCCACCACCACACCAGCGGCCACCACCCACTATCAGCCAGTCAGTTGTTCGTCCTCGTCCATACCGTCCTCCAAGGGTGTCTCGTCCTCGTGGATATGGGACTGGACACCATTTGGATCCTACTACTGGACGGCGTTAG 2829 0.4146 MAKDDDEMPKILHGTIEATIFNASSPPSSSSFPFKCLCLKAEKPAYVTIKIDKNKVAKTIEDIDRVWNQTFKIQCAYPIDSTITITLKTKTCTLGKYHIKGQKLLEEGGLINGFIPLLMEDNNGKRPNQQKLKLKFQLWFNSAEELLEPISWAKIMRFGNSCQGMRDSCTTFPQRSNCYVKLYHDAHHCSTFQPNIGLLCEAPRKLWEDVYKAIEGAKHIIYIAAWSLNPNLVLVRDPQTEIPHAKGIKLGDLLKKKAEEGVAVRIMLWDDEKSLPFIKKNKGVITNSNNTQHHDDDDDDDNDDAFAYFKKTRVICTKCPRLHHKFPTLFSHHQKTITLDTKSPNNSSDDDGEDERELMSFLGGLDLCEGRYDTEQHSLFHTLIRESHCYDFYQPNIGGASLNKGGPRTPWHDAHACVIGEAAWDVLTNFDQRWRKQCDSSFLVPTTTIANVLGPRNSTTSNTSIDKDWNWKVQVYRSIDDVSASFQSQSFRELHVERSIHEAYVEAIRSAEKFIYIENEYFIGGCQLWDKDRDSGCTNLIPIEIALKIVSKIKAKERFAVYIVIPMWSEGVPKSEAVQDILHWTRETMTMMYRLIGEALKENGENNNNGHPKDYLNFFCLANREQKGSGEYIPQHAPHPGTLYGSAQSNRRFMVYVHSKFMIVDDEYILIGSANVNQRSMDGERDTEIAIGCYQLSQDNKHEGMRHGEIHAFRMSLWYEHTASSANYDLFLEPQSLECVNIMRSIGDKMWHIYINDEIVDMEGVHLVTYPISVTQDGDLAMMSGDRHGRHAVSAPVGPQHGDGDQQLSDEDAEYARQEDIPERDDTDIPVTSSGVSTQHGSAPPGCYQTPPPPPHQSSSAPSPYYQTPSLPPQPPLSGSIWSPPPMSPPMIVAVPPPPPHQRPPPTISQSVVRPRPYRPPRVSRPRGYGTGHHLDPTTGRR 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00617 942 Gene3D Endonuclease Chain A 193 474 - -
Aip09g00617 942 PANTHER PHOSPHOLIPASE D ALPHA 7 785 - -
Aip09g00617 942 PANTHER PHOSPHOLIPASE D 7 785 IPR015679 -
Aip09g00617 942 MobiDBLite consensus disorder prediction 830 845 - -
Aip09g00617 942 Pfam Phospholipase D C terminal 729 786 IPR024632 -
Aip09g00617 942 Gene3D Endonuclease Chain A 492 703 - -
Aip09g00617 942 SUPERFAMILY Phospholipase D/nuclease 465 728 - -
Aip09g00617 942 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824
Aip09g00617 942 MobiDBLite consensus disorder prediction 805 827 - -
Aip09g00617 942 MobiDBLite consensus disorder prediction 846 906 - -
Aip09g00617 942 SUPERFAMILY Phospholipase D/nuclease 174 442 - -
Aip09g00617 942 SMART pld_4 328 371 IPR001736 GO:0003824
Aip09g00617 942 SMART pld_4 653 680 IPR001736 GO:0003824
Aip09g00617 942 Pfam PLD-like domain 654 691 IPR025202 -
Aip09g00617 942 MobiDBLite consensus disorder prediction 781 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00617 Aip-Chr9 7272069 7280254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00617 35 778 Phospholipase D Gene Family (Wang group) AT1G55180 57.257 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00617 K01115 - gmx:100812642 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00617 09 7272069 7280254 Aip09g00617 09 7272069 7280254 ECH
Aip08g00234 08 1682662 1685400 Aip09g00617 09 7272069 7280254 PCT