Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00614 ATGAGTCGAGAGCAACAGAAGGGGATAGGGAAGCAAGTCAAAGGCTCCGATGGTGCTGAGAAGGTTATCGTTGCCGTTAAGGCTTCGAAAGAAATTCCGAGGACTGCACTTGTTTGGTCCCTCACTCATGTTGTTCAACCTGGAGATTGCATCACCCTGCTAGTGGTTGTGCCTTCTCAAAGTTCAGGCAGAAGATTATGGGGTTTTCCTAGATTTGCTGGTGATTGTGCCAGTATCAGTAAAAAGTATCCTCCAGGAACAGTTTCAGAGCAGAAGCATGATATCACTGATTCTTGTTCTCAAATGATCCTTCAGCTCCATGACGTGTATGATCCGAATAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCTCCTTGTGGAGCAGTGGCCGCAGAAGCCAAGAAAGCGCAAGCCAATTGGGTTGTATTAGACAAACAGCTCAAACATGAAGAAAAGCGATGCATGGAAGAGCTACAGTGTAATATTGTGGTCATGAAGCGTTCCCAACCAAAAGTACTCCGCTTGAATTTGATTGGATCGCAAAAGGAAGCTGAAGAATCATGTCCATTGCCTTCTGAGCATGATGAGCTGGCTGAAAATCATACCAAAAAGAATACCGATTCACTAAATTCCATTAAGGGGCCTTCTGTAACTCCAACCAGCAGCCCGGAGCAAGGGACTCCATTTACTGCAACGGAAGCTGGAACTTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCATTCTTTATCTCAGAGACAAATGGTGAGTTGAAGAAAGAGGAGACTATCAAAGAAAATCAAGAACTTGATGATTCAGACACAGAAAGTGAAAGTTTGTCCACATCTTCGGCAAGCTTGAGATTCCAGCCATGGATCACAGAATTACTTTTACATCAACAATCATCTCAACGAAACGAAGGAAGGCCAGAAATATCTCAAGATATGCCTCAAACATCTACAACTAGAGCCTTGCTAGAAAAGTTCTCAAGGCTCGATCGAGGAGCTGGAATTGAAATGTCAAATTATAGAAATGAGTCAGATTTTAGTGGAAATCTCAGAGAGGCAATATCATTATCTAGAAATACTCCGCCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCACCTGTTTTCGGAAAACCTCCAAGATGGTTCAGCTATGCCGAGTTAGAACTTGCCACTGGTGGATTCTCTGAGGCCAACTTCCTGGCTGAGGGGGGATTTGGATCCGTTCACAGAGGGGTTCTACCGGATGGACAAGTCGTTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGACCTTGAGTTTTGCTCAGAGGTAGAAGTCCTGAGTTGTGCTCAGCACCGAAATGTTGTTATGCTGATTGGATTCTGTATAGAGGATAAGAGAAGGCTACTAGTTTACGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGAGACAGCGAGAACCATTAGAATGGGCTGCACGGCAAAAAATTGCCATTGGAGCTGCTCGTGGGTTACGATATCTTCATGAAGAGTGCAGAGTGGGATGCATTATCCACCGTGACATGCGGCCTAACAACATTCTCATAACTCATGATTTTGAACCACTGGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCCGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAAAAAGCTGATGTTTATTCATTCGGGGTGGTATTGGTGGAGCTTGTTACAGGGAGAAAAGCTGTGGATCTCACGCGGCCTAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCACTGTTGGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGGAACCAATACTTAGAAAATGAGGTCTATTGCATGTTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTTCGTATACTGGACGGCGACATGGTCATGGACACGAGTTACATTTCAACTCCAAGTTATGATGTGGGAAACCGGAGTGGCAGACTCTGGTCGGAGCCGCTGCAGAGGCAGCACCATTACAGCGGTCCTCTGTTAGAAGAGTCACTTGAATCATTCAGTGGGAAGCTATCTCTTGACAAATACAGGCCTGCATATTGGGATAGGGACAACAAAGCAAGAAGGACTTCATGTGAAGATGACATTTAG 2247 0.449 MSREQQKGIGKQVKGSDGAEKVIVAVKASKEIPRTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASISKKYPPGTVSEQKHDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGSQKEAEESCPLPSEHDELAENHTKKNTDSLNSIKGPSVTPTSSPEQGTPFTATEAGTSSVSSSDPGTSPFFISETNGELKKEETIKENQELDDSDTESESLSTSSASLRFQPWITELLLHQQSSQRNEGRPEISQDMPQTSTTRALLEKFSRLDRGAGIEMSNYRNESDFSGNLREAISLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSEANFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWAARQKIAIGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGNQYLENEVYCMLHAASLCIRRDPHSRPRMSQVLRILDGDMVMDTSYISTPSYDVGNRSGRLWSEPLQRQHHYSGPLLEESLESFSGKLSLDKYRPAYWDRDNKARRTSCEDDI 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00614 748 Gene3D Transferase(Phosphotransferase) domain 1 477 683 - -
Aip09g00614 748 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 17 706 - -
Aip09g00614 748 CDD USP_Like 21 144 - -
Aip09g00614 748 PANTHER OS01G0253100 PROTEIN 17 706 IPR045271 GO:0004714|GO:0006468
Aip09g00614 748 Pfam Protein tyrosine and serine/threonine kinase 406 670 IPR001245 GO:0004672|GO:0006468
Aip09g00614 748 MobiDBLite consensus disorder prediction 205 254 - -
Aip09g00614 748 MobiDBLite consensus disorder prediction 302 321 - -
Aip09g00614 748 MobiDBLite consensus disorder prediction 204 285 - -
Aip09g00614 748 CDD STKc_IRAK 407 673 - -
Aip09g00614 748 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Aip09g00614 748 ProSiteProfiles Protein kinase domain profile. 401 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00614 748 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Aip09g00614 748 SUPERFAMILY Protein kinase-like (PK-like) 385 683 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00614 Aip-Chr9 7193034 7196884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00614 381 690 Trihelix Transcription Factor Family AT1G70460 52.500 9.64e-104 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip09g00614 PK_Tyr_Ser-Thr 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00614 - - gmx:100816340 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00614 09 7193034 7196884 Aip09g00614 09 7193034 7196884 ECH
Aip08g00231 08 1665463 1670477 Aip09g00614 09 7193034 7196884 PCT