Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00565 ATGGACGAGGACCAAGAGATGGAGATGTTCCAAACGGACAACGATTTCGAAGAAGGCCAGTGGATTGGCGGCGAATTCTACTACAAAAAGCGCAAAGAGAAGCCTATTCAGACTAGAGATGATGTCCTCTACGGTGTTTTTGCCGGCTCCGACGATGAGGACGACGCCGATTATTCCAGCAAGAAACGCAGGAAGGACCTTTCCAAGAAACAGGACCTCACCAAGCGGGTGAATTTTATTTCTACTGGAACTTTTATGCCGAATCAAGATGTTGTTGATAACAATAGAAATTCTAAAGAACATGGGGAAAAAGATGGTTATGTTAGTGAGAATAGGCCAGGTTTAGGTCTTGGAATGAGATCTGCTCCCACTTCAGATGCTGGTTTAGGATTCACTAGTAGTAATGGTGATAGGAATAATGGTTCTGATGAGAATATTGATGATGGTGATGATCATAATTTTTTGCCTACGGCTTTTGGGAAGAAGATTAAGGAAGGGGCGATGCGGAGGGAGAGGGAAAGGGAGAGGGAGAAATTGGAGAAGAAGAGGGGTCAGCGTCAGAGTTCGGATCAAGATGGTTTTGGTAATGCGGGGAAATTCTATAACAATGAAATAGGGATGAAGCTGTTGGAAAAGATGGGTTATAGAGGGGGCGGTCTTGGAAAGAATGAGCAAGGTATTGTGGCTCCTATCGAGGTGAAAATGAGGGCTAAGAATTCAGGTATTGGTTTTAGTGATGCAAGGGAGGCGCCGCCACCATCGTTGCCTGTTTTGCAGCAACAGAACAAAAGCACGGTGGAAGCAGTGCAGCCTGCGGCTAGCAGAACAAAGGAGAGGCTGTGGTCAAAGCAGTCACGGTTGAAGAAGAAGAAAGAGGAGGAAGTGTATGTTACTGCTGAGGAGTTGTTGGCAAGCAAGCAAGAACAGAATTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGGCCACAAGTTCGGGTTTATACAAATTTATCTGATTTAAATGCTGAGGAGAAAGCAAAGGAGGAGGAAGTCCCAATGCCGGAACTTCAGCATAACGTTGGGTTGATTGTTCGGTTGGCTGAGGCTGACATTCAAGAGATTGATAGAGATTTGAGGAGAGAAAGGGAGACAGCTCTCAGCTTGAAAAAAGAAAAAGAGAAGTTAGAATCTGAAGCAGCATTCCAAAAGCGTCAACTGGATAATATGGAGGAAATAATGAGTGTCTTGGACCAAGTAGCTGAAGAGAGCACTTCTGGAACACTAACATTAGATTTCCTTGCTAGATGCTTCAGTGACTTGCATAAGAGATATGCCGATAGCTACAAGGTGTGTAATTTGTCCTGCATTGCTTGCTCATATGCTCTTCCTTTGTTTATTAGAATGGTCCAAGATTGGGATCCACGGTATCCTGAGCCAATGCTACGATTTCTTGATTTGTGGGAGAAGTTGCTTCCTCCTTCGGTCCTCACTGCCATATTGGAGAATATAGTCTTACCAAAATTGTCAGCTGCTGTAGATACTTGGGAACCACATCTAGAGACCATTCCTATCCACACTTGGGTGCATCCATGGCTACCAAGGATAGAGCACAAGTTGGAAGGTATTTACCAGGTCATTCGTTCTAAATTGAGTTCTGTTCTTGGTGCCTGGCATCCAAGTGACGCCTCTGCATATACCATATTGTCTCCGTGGAAGACTGTCTTTGATGCTGTAAGTTGGGAACAACTTATGCTTCGATTTATTGTGCCTAAGTTGCAACTTGTCTTGCAGGAGTTTGAAGTCAATCCAGCAAGTCAGAAGCTCGATCAATTTTTTTGGGTAATTAAATGGGCTTCTGTGATTCCAATTCATATCATGGTGGACATGATGGAGAAGTTCTTCTTCACAAAGTGGCTTCAGGTTTTGTATCAGTGGTTGTGCTCAAATCCTAACTTTGAAGAAGTTATGAAGTGGTATAATGGATGGAAGGAGCTTATTCCAGAAGAACTATTGGCAAATGAAAGTATCCGATTCCAGATTAACCGTGGTTTAGATATGATGAGTCAGGCTGTTGACGGAATGGAGGTTTTCCAACCTGGTTTGAAGGAGAATATCAGCTATCTTCGGGTACGTGAGCAACGACAATTTGAGGCTCAGCAGAAAGCAGTAGTAACCTATGCTCAACAGCAAGCTGCTGCAGCATTGGGTGGTGCCAACGCAGATGGTGTGCATGATTTGAGCTTGAAAGAAGTCATTGAGGCTCATGCCCAGCATCATGGTTTGTTGTTCAATATTAAGCCTGGTAGAATGCACAACGGTCACCAAATATATGGATTTGGTAATGTCAGCATAATAATAGACTCGCTACATCAGAAGGTATATGCTCAACATGAGGAAACATGGTCCTTGGAATCTCTTCAAGGATTGCTAGAGTTGCATAATAAATCCCTTGGTAAAAGACACTAA 2448 0.4355 MDEDQEMEMFQTDNDFEEGQWIGGEFYYKKRKEKPIQTRDDVLYGVFAGSDDEDDADYSSKKRRKDLSKKQDLTKRVNFISTGTFMPNQDVVDNNRNSKEHGEKDGYVSENRPGLGLGMRSAPTSDAGLGFTSSNGDRNNGSDENIDDGDDHNFLPTAFGKKIKEGAMRREREREREKLEKKRGQRQSSDQDGFGNAGKFYNNEIGMKLLEKMGYRGGGLGKNEQGIVAPIEVKMRAKNSGIGFSDAREAPPPSLPVLQQQNKSTVEAVQPAASRTKERLWSKQSRLKKKKEEEVYVTAEELLASKQEQNLEVVQKVYDMRGPQVRVYTNLSDLNAEEKAKEEEVPMPELQHNVGLIVRLAEADIQEIDRDLRRERETALSLKKEKEKLESEAAFQKRQLDNMEEIMSVLDQVAEESTSGTLTLDFLARCFSDLHKRYADSYKVCNLSCIACSYALPLFIRMVQDWDPRYPEPMLRFLDLWEKLLPPSVLTAILENIVLPKLSAAVDTWEPHLETIPIHTWVHPWLPRIEHKLEGIYQVIRSKLSSVLGAWHPSDASAYTILSPWKTVFDAVSWEQLMLRFIVPKLQLVLQEFEVNPASQKLDQFFWVIKWASVIPIHIMVDMMEKFFFTKWLQVLYQWLCSNPNFEEVMKWYNGWKELIPEELLANESIRFQINRGLDMMSQAVDGMEVFQPGLKENISYLRVREQRQFEAQQKAVVTYAQQQAAAALGGANADGVHDLSLKEVIEAHAQHHGLLFNIKPGRMHNGHQIYGFGNVSIIIDSLHQKVYAQHEETWSLESLQGLLELHNKSLGKRH 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00565 815 MobiDBLite consensus disorder prediction 54 71 - -
Aip09g00565 815 PIRSF TFIP11 461 810 IPR024933 -
Aip09g00565 815 PIRSF TFIP11 1 470 IPR024933 -
Aip09g00565 815 Pfam Tuftelin interacting protein N terminal 4 103 IPR022159 -
Aip09g00565 815 MobiDBLite consensus disorder prediction 141 188 - -
Aip09g00565 815 Coils Coil 358 406 - -
Aip09g00565 815 MobiDBLite consensus disorder prediction 47 71 - -
Aip09g00565 815 Pfam G-patch domain 203 243 IPR000467 GO:0003676
Aip09g00565 815 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 9 801 IPR045211 GO:0000390
Aip09g00565 815 PANTHER TUFTELIN-INTERACTING PROTEIN 11 9 801 - -
Aip09g00565 815 Coils Coil 289 309 - -
Aip09g00565 815 SMART G-patch_5 200 245 IPR000467 GO:0003676
Aip09g00565 815 ProSiteProfiles G-patch domain profile. 202 247 IPR000467 GO:0003676
Aip09g00565 815 MobiDBLite consensus disorder prediction 126 140 - -
Aip09g00565 815 MobiDBLite consensus disorder prediction 94 108 - -
Aip09g00565 815 MobiDBLite consensus disorder prediction 84 198 - -
Aip09g00565 815 Pfam GC-rich sequence DNA-binding factor-like protein 464 636 IPR022783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00565 Aip-Chr9 6243359 6245806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00565 199 243 C2H2 Transcription Factor Family AT5G26610 46.667 5.51e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00565 K13103 - gmx:100783256 1145.18