Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00525 ATGCTTGGGTGGCGTCATAATCCAATTAAGGAGTCAGAATTGGAAAATAAGCAACGAGAGTATTCATTTAATGAGGTGGTTAATATGACCAACAATTTTGATAGGATTCTTGGCAGAGGTGGATTCGGAACAGTTTACCATGGCTTTATTGAGGACATTGAAGTGGCTGTTAAGATGCTTTCATTATCATCAGTGCAAGGATATCAACAATTTATTGCAGAGGTTAAACTTCTAATGAGGGTGCATCACCGAAATCTGACTTCTCTTATTGGTTATTGCAACGAAGAAACTAACATAGGACTCATTTATGAATACATGAAAAATGGAGATTTAGATGAACATCTTTCAGGAAAAAACAATAGGGGGAAGTCTTTGAACTGGGAAGATAGACTTCCAATAGCAGTAGATGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATTCACAGAGATGTGAAATGTCCAAATATTCTATTAAATGAAAACTTCCATGCCAAACTCGCTGATTTTGGATTATCCAAATGTTTTGCGGCTGAGGGCGATACACATGTGTCAACCATTGTGGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACAACATCAAACAGATTGACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATTACAGGTCAATCGGTGATAATAATAAAGAAAGACACGACTCATCATATAATTGAACGGGTTAATTCTATGATTGCTGAAGGGGACATAACAAAAGTTGTTGACTCAAGGTTACAAGGAGATTTTGACAATAACTCTGCATGGAAAGCGGTTGAAATAGCAATGGCCTCTGTATCTTCCACTTCAGTGAAAAGGCCATACATGAGAGATGTAGTGACACAGTTGAAGGACTGTTTGGCTGCAGAGTTAGCCCGAAAACATAATATTTGTAACCTTCAAAATGAAGATTCAGTTGAAGAGTTCAGTGTGAATTTAATTAGTACTGATATGACTCCATCAGCTAGATAG 1026 0.3772 MLGWRHNPIKESELENKQREYSFNEVVNMTNNFDRILGRGGFGTVYHGFIEDIEVAVKMLSLSSVQGYQQFIAEVKLLMRVHHRNLTSLIGYCNEETNIGLIYEYMKNGDLDEHLSGKNNRGKSLNWEDRLPIAVDAAQGLEYLHNGCKPPIIHRDVKCPNILLNENFHAKLADFGLSKCFAAEGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQSVIIIKKDTTHHIIERVNSMIAEGDITKVVDSRLQGDFDNNSAWKAVEIAMASVSSTSVKRPYMRDVVTQLKDCLAAELARKHNICNLQNEDSVEEFSVNLISTDMTPSAR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00525 341 PANTHER OS07G0107800 PROTEIN-RELATED 11 314 - -
Aip09g00525 341 ProSitePatterns Protein kinases ATP-binding region signature. 37 58 IPR017441 GO:0005524
Aip09g00525 341 Pfam Protein tyrosine and serine/threonine kinase 33 301 IPR001245 GO:0004672|GO:0006468
Aip09g00525 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Aip09g00525 341 SMART serkin_6 31 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00525 341 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 11 314 - -
Aip09g00525 341 Gene3D Transferase(Phosphotransferase) domain 1 106 326 - -
Aip09g00525 341 SUPERFAMILY Protein kinase-like (PK-like) 12 301 IPR011009 -
Aip09g00525 341 ProSiteProfiles Protein kinase domain profile. 31 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00525 341 Gene3D Phosphorylase Kinase; domain 1 18 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00525 Aip-Chr9 5680405 5681965 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00525 11 341 Receptor kinase-like Gene Family AT1G51820 57.658 1.16e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip09g00525 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00525 - - aip:107614771 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00525 09 5680405 5681965 Aip09g00525 09 5680405 5681965 ECH