Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00521 ATGCTTTTAGTGATTGCAGAAGCAGTTATAATCTTTCGCCAAAGAAAGCGATATGCTGCTGCTAGGAACATTATTCTTGGGAAGCGTGGTAGTTCAATTAAGGGGTCAGGATTGGAATCGAAGCAACGACAATACTCATTTAATGAGATTGTTAAGATGACCAACAACTTTGATAGGATTCTTGGCAGAGGTGGATTCGGAACAGTTTACCACGGCTTTATTGAGGACATTCACGTGGCTGTCAAGATGCTTTCCCTATCATCAGTGCAAGGATATCAGCAATTTATTGCAGAGGCAAGAAAAAACAACAGGGAAAAGTCCTTGAATTGGGAAGATAGACTTCGAATAGCATTGGATGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCCATAGTCCACAGAGATGTAAAATGCACAAATATTCTATTAGATGAAAACTTGCATGCCAAACTTGCTGATTTTGGATTATCCAAATGCTTTGCTGCTGACGGGGATACACATGTATCAACAATTGCTGCCGGAACTCCAGGCTACCTTGATCTTGAGTTGACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAATCGGTTATAATAGTAAGGGAAGATACAGCTTATCATATAAGTCAGCGGGTTAACTCTATGGTTGCTGAAGGGGATATAACAAAAGTTGTTGATTCAAGGATACAAGGAGATTTTGACAGAAACTCTGCATGGAGAGCGGTTGAAATAGCAATGGCCTCTTTGTCTGTCACTTCGGCGGAAAGACCATACATGAGAGATATAGTGACACACTTGAAGGACTGTTTGGCTGCAGAGTTAGCCCGTAAACATAATTTTTGTGACCTTCAAAATGAAGATTCAGTTGAACAGTTCAGTGTGAATTTAATTAGTACTGATATGACTCCATCAGCTAGATAG 957 0.3992 MLLVIAEAVIIFRQRKRYAAARNIILGKRGSSIKGSGLESKQRQYSFNEIVKMTNNFDRILGRGGFGTVYHGFIEDIHVAVKMLSLSSVQGYQQFIAEARKNNREKSLNWEDRLRIALDAAQGLEYLHNGCKPPIVHRDVKCTNILLDENLHAKLADFGLSKCFAADGDTHVSTIAAGTPGYLDLELTEKSDVYSFGVVLLRIITGQSVIIVREDTAYHISQRVNSMVAEGDITKVVDSRIQGDFDRNSAWRAVEIAMASLSVTSAERPYMRDIVTHLKDCLAAELARKHNFCDLQNEDSVEQFSVNLISTDMTPSAR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00521 318 ProSiteProfiles Protein kinase domain profile. 1 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00521 318 SMART serkin_6 55 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00521 318 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
Aip09g00521 318 Gene3D Transferase(Phosphotransferase) domain 1 98 303 - -
Aip09g00521 318 Pfam Protein kinase domain 104 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00521 318 Gene3D Transferase(Phosphotransferase) domain 1 29 97 - -
Aip09g00521 318 PANTHER OS07G0107800 PROTEIN-RELATED 3 100 - -
Aip09g00521 318 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 103 291 - -
Aip09g00521 318 SUPERFAMILY Protein kinase-like (PK-like) 39 278 IPR011009 -
Aip09g00521 318 PANTHER OS07G0107800 PROTEIN-RELATED 103 291 - -
Aip09g00521 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Aip09g00521 318 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 3 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00521 Aip-Chr9 5631624 5633286 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00521 1 318 Receptor kinase-like Gene Family AT1G51890 43.360 1.19e-94 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip09g00521 PK_Tyr_Ser-Thr 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00521 - - aip:107614771 598.971