Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00518 ATGACCAACAACTTTGATAGGATTCTTGGCAGAGGTGGATTCGGAACAGTTTACCATGGCTTTATTGAAGACATTCAAGTGGCTGTCAAGATGTTTTCTCTATCTTCAGTGCATGGATATCAACAATTTGTTGCAGAGGCAAGAAAAAACAACCGGAGAAGGTCCTTGAATTGGGAAGATAGACTTCGAATAGCATTAGATGCCGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATCCACAGAGATGTAAAATGCACAAATATTCTATTAAATGAAAACTTGCATGCCAAACTCGCTGATTTTGGATTGTCCAAATGCTTTGCGGCTGACGGCGATACGCATGTGTCGACAATTGTGGCGGGAACTCCAGGCTACCTAGATCCTGAGTATACAACATCAAACAGATTGACAGAGAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAGCCAGTAGTAATGGTAAGGGAAGACATGATTCATCATATAAGTCAGCGTATTAATACAATGGTTACTAGAGGGGATATAACAAAAATTGTTGACTCAAGATTACAAAAAGATTTCGACAGCAACTCTGCATGGAGAGCAGTTGAAATAGCAATGACCTCTGTGTCTGCCATTTCAGTGGAAAGACCATACATGAGTGATATAGTGAAAGAGCTAAAGGAGTGTTTGGCTGCAGAATTAGCTCGAAAACATACTAGTTGTGACCTTCAAAATGAAGATTTGGTTGGGCAGGTGAGTCTAAACTTGATTAGTACTGATATCACTCCCATAGCTAGGAGCTGTTACGCTGTCGTCGAGCAACTGCCACCGCCGGAGCTCGCCGTTGAGCCTGCCTGTTTCACGTTCTGCCCTTTCTTTGCTCCGCCGGGGGCTGAGCCCTGCCTCTCCCTGTTCATCAGAGCTTGTGGTGTTGTTGTGGGAGTCGCTGTCAGAGGAGAGGAACTGCCACTACCGCTGTTCCATTGTGTCCTTCACCGTCAACGTCGGGCAGTCACCAAAGCTGCTGATGCTCCATCCCTTATTTTCGTTTTCTTTGGGTTGTTGTTGAGGTTGCTGCAGTGA 1101 0.4423 MTNNFDRILGRGGFGTVYHGFIEDIQVAVKMFSLSSVHGYQQFVAEARKNNRRRSLNWEDRLRIALDAAQGLEYLHNGCKPPIIHRDVKCTNILLNENLHAKLADFGLSKCFAADGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQPVVMVREDMIHHISQRINTMVTRGDITKIVDSRLQKDFDSNSAWRAVEIAMTSVSAISVERPYMSDIVKELKECLAAELARKHTSCDLQNEDLVGQVSLNLISTDITPIARSCYAVVEQLPPPELAVEPACFTFCPFFAPPGAEPCLSLFIRACGVVVGVAVRGEELPLPLFHCVLHRQRRAVTKAADAPSLIFVFFGLLLRLLQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00518 366 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 52 246 - -
Aip09g00518 366 SMART serkin_6 3 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00518 366 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 1 48 - -
Aip09g00518 366 ProSiteProfiles Protein kinase domain profile. 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00518 366 PANTHER OS07G0107800 PROTEIN-RELATED 52 246 - -
Aip09g00518 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 83 95 IPR008271 GO:0004672|GO:0006468
Aip09g00518 366 Gene3D Transferase(Phosphotransferase) domain 1 1 45 - -
Aip09g00518 366 Gene3D Transferase(Phosphotransferase) domain 1 46 256 - -
Aip09g00518 366 Pfam Protein kinase domain 53 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00518 366 PANTHER OS07G0107800 PROTEIN-RELATED 1 48 - -
Aip09g00518 366 ProSitePatterns Protein kinases ATP-binding region signature. 9 30 IPR017441 GO:0005524
Aip09g00518 366 SUPERFAMILY Protein kinase-like (PK-like) 5 232 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00518 Aip-Chr9 5595935 5599707 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00518 1 272 Receptor kinase-like Gene Family AT1G51820 50.637 4.71e-95 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip09g00518 Pkinase 3.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00518 - - aip:107614772 520.776