Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00516 TTATGTTGGTATACAGGTATAAAGATGATATATATGACCGAATATGGGAGCCTTATTGGGACGACAAGTGGACACAATTAAGCAGCAGTCTTAGCAATGATGAGTTTGATCAGAATCACTTTAAACCACCAGCAGTTGTGTTGAAGACTGCAGCTACACCAAAAAATGCTACTGCCTCATTAGACTTCCATTGGGAGGATGATTTTGCAGATAACAATAATGGAGCTCAGCACCAATACTATTTCTACTTACACTTCACTGAGCTTCAGCAGCTGGGTGCAAATCAAACAAGATCATTCAATGTCACCATAAATGGCTTGCCTTATTGGGAAAATGTGGGACTCACATATGCTTCTGAACTCACCAGATATACTAGAGGCCCTTCGTATGAAGGCAAAAGGCATCACATTTCACTTTTCCGGACAGAATCTTCCTCCCTTCCACCCATCATCAATGCTCTTGAGATTTATCTAGTGAAGGATTTCTCATCACAGTTAGAAACCCAAAAAGATGAAGTGGATGCAGTCACAAATATCAAGAGGACTTATAAGGTGGACAGTAGAAACTGGCAAGGAGATCCATGTGCCCCCACTACATACAAGTGGGATGGTGTAGAGTGTAGCTCTTTTAATGGCTTTCAAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTAACCGGACATATACCTGCTGATATTTCCAAGCTTACCATGTTAAAGTCTTTAGATTTATCAAACAATGACTTAAGTGGGAGTATTCCATCTTTTTTGGCACAACTGCAATCACTGGGATACTTAAACTTGACGAACAACAACCTAACAGGTTCAGTTTCAAATGAACTCCTTCAAAAACAAAGTGATGGTCTATTATCCTTGAGTGTGGGGAAAAATCCAAATCTATGTGCATCAACTTCATGCAACCCGCAAACAAATGATACAAGAAAGAAAGAGAATAATGTAGTTATTGCAGTGGTAACATCAATTGCAGGGATATTGGTGGTTCTAGTGATTACAGCAGCAGTTATAATCTTTCGCCAAAGCAAGCGATATGCTGCTGCTACAAACATTATTCTTGGGAAGCGGCGTAATTCCATAAAGGGGTCAGAATTGGAATCCAGGCAACGACAATATTCATTTAGTGAGGTTATTAAAATGACGAACAACTTTGATAGGATTCTTGGCAGAGGTGGGTTCGGAACAGTTTACCACGGCTTTATTGAGGACATTCAAGTGGCTGTCAAGATGCTTTCCCTATCTTCAGTTCATGGATATCAACAATTTGTTAAGCTTCTAATGAGAGTACATCACCGAAATTTGACTTCTCTTATTGGTTACTGCAATGAAGACACTAATATAGGACTCATCTATGAATATATGTCAAATGGAAACTTAGATGAACATCTTTCAGGAAAAAACAATAGGGGAAAGTCTTTGAACTGGGAAGATAGACTTCGAATAGCAGTAGATGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATTCACAGAGATGTGAAATGTCCAAATATTCTATTAAATGAAAACTTCCATGCCAAACTCGCTGATTTTGGATTATCCAAATGCTTTGCGGCTGAGGGCGATACACATGTGTCAACCATTGTGGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACAACATCAAACAGATTGACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATTACAGGTCAACCGGTGATAATAATAAAGGAAGACACAACTCATCATATAATTCAACGAGTTAATTCTATGATTGCTGAAGGGGATATAACAAAAGTTGTTGACTCAAGGTTACAAGGAGATTTTGACAATAACTCTGCATGGAAAGCGGTTGAAATAGCAATGGCCTCTGTATCTGCCACTTCAGTGCAAAGGCCATACATGAGAGATATAGTGACACAGTTGAAGGACTGTTTGGCTGCAGAGTTAGCCCGAAAACGTAATATTTGTGACCTTCAAAATGAAGATTTAGTTGAACAGTTCAGTGTGAATTTAATTAGTACTGATATGACTCCATCAGCTAGATAG 2087 0.39 MLVYRYKDDIYDRIWEPYWDDKWTQLSSSLSNDEFDQNHFKPPAVVLKTAATPKNATASLDFHWEDDFADNNNGAQHQYYFYLHFTELQQLGANQTRSFNVTINGLPYWENVGLTYASELTRYTRGPSYEGKRHHISLFRTESSSLPPIINALEIYLVKDFSSQLETQKDEVDAVTNIKRTYKVDSRNWQGDPCAPTTYKWDGVECSSFNGFQRITSLNLSSSGLTGHIPADISKLTMLKSLDLSNNDLSGSIPSFLAQLQSLGYLNLTNNNLTGSVSNELLQKQSDGLLSLSVGKNPNLCASTSCNPQTNDTRKKENNVVIAVVTSIAGILVVLVITAAVIIFRQSKRYAAATNIILGKRRNSIKGSELESRQRQYSFSEVIKMTNNFDRILGRGGFGTVYHGFIEDIQVAVKMLSLSSVHGYQQFVKLLMRVHHRNLTSLIGYCNEDTNIGLIYEYMSNGNLDEHLSGKNNRGKSLNWEDRLRIAVDAAQGLEYLHNGCKPPIIHRDVKCPNILLNENFHAKLADFGLSKCFAAEGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQPVIIIKEDTTHHIIQRVNSMIAEGDITKVVDSRLQGDFDNNSAWKAVEIAMASVSATSVQRPYMRDIVTQLKDCLAAELARKRNICDLQNEDLVEQFSVNLISTDMTPSAR 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00516 694 ProSiteProfiles Leucine-rich repeat profile. 238 260 IPR001611 GO:0005515
Aip09g00516 694 SUPERFAMILY Protein kinase-like (PK-like) 368 654 IPR011009 -
Aip09g00516 694 Pfam Malectin-like domain 4 157 IPR024788 -
Aip09g00516 694 Gene3D Phosphorylase Kinase; domain 1 374 458 - -
Aip09g00516 694 SUPERFAMILY L domain-like 197 298 - -
Aip09g00516 694 PANTHER OS07G0107800 PROTEIN-RELATED 4 694 - -
Aip09g00516 694 PRINTS Leucine-rich repeat signature 260 273 - -
Aip09g00516 694 PRINTS Leucine-rich repeat signature 239 252 - -
Aip09g00516 694 Gene3D Transferase(Phosphotransferase) domain 1 459 678 - -
Aip09g00516 694 PANTHER PUTATIVE-RELATED 4 694 - -
Aip09g00516 694 ProSitePatterns Protein kinases ATP-binding region signature. 393 414 IPR017441 GO:0005524
Aip09g00516 694 ProSiteProfiles Protein kinase domain profile. 387 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00516 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Aip09g00516 694 Pfam Protein tyrosine and serine/threonine kinase 389 654 IPR001245 GO:0004672|GO:0006468
Aip09g00516 694 Gene3D Ribonuclease Inhibitor 169 291 IPR032675 -
Aip09g00516 694 SMART serkin_6 387 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00516 Aip-Chr9 5530380 5575491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00516 5 694 Receptor kinase-like Gene Family AT1G51850 46.449 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip09g00516 PK_Tyr_Ser-Thr 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00516 - - ahf:112775583 1258.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00516 09 5530380 5575491 Aip09g00516 09 5530380 5575491 ECH