Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00514 ATGTTCGCAAATTCTGTTTTTCTATTGCTTGGAGCTCTTTCTTTCATAGCAACGGTCCAAGGCCAGGATCAATCAGGATTTATTAGCATAGATTGTGGGCTACCTGAAAATTCCAATTACACTGAAAAGAACACAGGAATCAATTACATTTCAGATGCTAATTTCATTGATTCTGGTGTGAGTAAAACTGTGTCACCCCAAGATAAGACCACTCATCCACAATATTTTAATTACCTTCGGAGTTTTCCTAATGGAATAAGAAATTGTTACAGAATAAATGTAACAAGTGTTACTAGATATTTAATCAGAGCTAGTTTTTTGTATGGAAACTATGATAGTCTTAATACGCTTCCAGAGTTTGATCTTTATCTTGGAGTTCATTTTTGGGAGACGGTAAAATTCACAAATTCTTCAGTCAGCATAAACTATGAGATCATCCACACTCTATCGCTGGATTATATCCATATCTGCTTGGTTAACAAAGGCACAGGGACACCATTCATTTCAGCTATAGAAATGAGGGTTTTGGACAATGTCGACTCTACTTATAGCACTATAGACTCATCTACACGATTGGCACGATTCCGAAGGTATCAAGATGATCCTTATGACCGGATATGGGAGCCTTATTGGGACGACAAGTGGAGACTAATAAGCAGCAACCATAGCAATAATGCCCTTGATCAGGAAGCCTTTAATCCACCAGCAGTTGTGTTAGAGACTGCAGCCACATCAATAACTGCTACTGCCTCATTAGACTTCCATTGGGAGAATGATGACAATGAAACTCAGCACCAATACTATTTCTACCTGCACCTCATAGAGCTTCAGCAGTTGGGTCAAACAAGATCATTCAATATCAACATGGATGGTAAGACTTGGAATACAGCTGAATCACTCAAATACGGAAAAGTATACACCAAACATGTTAGAGGACTTTCCTCTGGATGCAAAAAGTGTCGCATTTCACTTATTCGGACAGAATCTTCTACCCTTCCACCCATTATCAGTGCTCTTGAGATTTATTTAGCAAAAGATTTTCCATCATCACAGTTAGAAACCCACAGAGATGACGCGGAGGCAGTCACAAACATTAAGAACGCTTATAGGGTGGAGAGTAGAAACTGGCAAGGAGATCCATGTCTTCCCAATGCATACAAATGGCAAGGTGTAGACTGTAGCACTATTGATGGCTTTCTAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTCACCGGACATATACTGACTGATATCTCCAAGCTTACTATGTTAAAGTCCTTAGATTTATCAGACAATGGTTTAAGTGGGAATATACCTAATTTTTTGGCGCAACTGCAATCACTAGAATACTTAAACTTAGCACACAACAACCTTACAGGTTCAGTTTCAAATGAACTCCTTCAAAAACAAAGTGATGGTCGATTAACCTTGAGTGTGGCGCAAAATCCAAATCTTCTATGTGGAACAACTTCATGCACCCTGCAAACAAATGCTACAAGAAAGAAAAAGAATAATGCAGTTATTACAGTGGTAGCATCAATTGCAGGGATATTGCTGCTTCTAGGGATTGCAGCAGTTATAATCTTTCGCCGAAGAAAGACATATGATGCTGCTAACAACGTTGTGCTTGGGAGGCGTCATAATCCAATTAAGGAGTCAGAATTGGAAACTAAGCAACGAGAGTATTCATTTAATGAGGTGGTTAAGATGACCAACAATTTTGATAGAATTCTTGGCAGAGGTGGATTCGGAACAGTTTACCATGGCTTTATTGAGGACATTGAAGTGGCTGTCAAGATGCTTTCGTTATCATCAGTGCAAGGATATCAACAATTTATTGCAGAGGTTAAGCTTAGAGTACATCATCGAAATCTGACTTCTCTTGTTGGTTATTGCAATGAAGAAACTAATATAGGACTCATCTATGAATACATGAAAAATGGAGATTTAGATAAAAATCTTTCAGGAAAAAACAATAGGGGAAGGTCTTTGAACTGGGAAGATAGACTTCGAATAGCAGTAGATGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATTCACAGAGATGTGAAATGTCCAAATATTCTATTAAATGAAAACTTCCATGCCAAACTCGCTGATTTTGGATTATCCAAATGTTTTGCGGCTGAGAGCGATACACATGTGTCAACCAATGTGGCCGGAACTCCAGGCTACCTAGATCCTGAGTACACAACATCAAATAGATTGACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATTACAGGTCAACCGGTGATAATAATAAAGGAAGACACAACTCATCATATAATTCAACGAGTTAATTCAATGATTGCTGAAGGGGATATAACAAAAGTTGTTGATTCAAGGTTACAAGGAGATTTTGACAATAACTCTGCATGGAAAGCGGTTGAAATAGCAATGGCCTCTGTATCTGCCACTTCAGTGCAAAGGCCATACATGAGAGATATAGTGACACAGTTGAAGGACTGTTTGGCTGCAGAGTTAGCCCGAAAACGTAATATTTGTGACCTTCAAAATGAAGATTTAGATGAACAGTTCAGTGTGAATTTAATTAGTACTGATATGACTCCATCAGCTAGATAG 2649 0.3839 MFANSVFLLLGALSFIATVQGQDQSGFISIDCGLPENSNYTEKNTGINYISDANFIDSGVSKTVSPQDKTTHPQYFNYLRSFPNGIRNCYRINVTSVTRYLIRASFLYGNYDSLNTLPEFDLYLGVHFWETVKFTNSSVSINYEIIHTLSLDYIHICLVNKGTGTPFISAIEMRVLDNVDSTYSTIDSSTRLARFRRYQDDPYDRIWEPYWDDKWRLISSNHSNNALDQEAFNPPAVVLETAATSITATASLDFHWENDDNETQHQYYFYLHLIELQQLGQTRSFNINMDGKTWNTAESLKYGKVYTKHVRGLSSGCKKCRISLIRTESSTLPPIISALEIYLAKDFPSSQLETHRDDAEAVTNIKNAYRVESRNWQGDPCLPNAYKWQGVDCSTIDGFLRITSLNLSSSGLTGHILTDISKLTMLKSLDLSDNGLSGNIPNFLAQLQSLEYLNLAHNNLTGSVSNELLQKQSDGRLTLSVAQNPNLLCGTTSCTLQTNATRKKKNNAVITVVASIAGILLLLGIAAVIIFRRRKTYDAANNVVLGRRHNPIKESELETKQREYSFNEVVKMTNNFDRILGRGGFGTVYHGFIEDIEVAVKMLSLSSVQGYQQFIAEVKLRVHHRNLTSLVGYCNEETNIGLIYEYMKNGDLDKNLSGKNNRGRSLNWEDRLRIAVDAAQGLEYLHNGCKPPIIHRDVKCPNILLNENFHAKLADFGLSKCFAAESDTHVSTNVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQPVIIIKEDTTHHIIQRVNSMIAEGDITKVVDSRLQGDFDNNSAWKAVEIAMASVSATSVQRPYMRDIVTQLKDCLAAELARKRNICDLQNEDLDEQFSVNLISTDMTPSAR 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00514 882 Pfam Protein tyrosine and serine/threonine kinase 576 842 IPR001245 GO:0004672|GO:0006468
Aip09g00514 882 PANTHER PUTATIVE-RELATED 13 882 - -
Aip09g00514 882 SUPERFAMILY L domain-like 357 470 - -
Aip09g00514 882 PANTHER OS07G0107800 PROTEIN-RELATED 13 882 - -
Aip09g00514 882 ProSiteProfiles Protein kinase domain profile. 574 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00514 882 ProSitePatterns Protein kinases ATP-binding region signature. 580 601 IPR017441 GO:0005524
Aip09g00514 882 Gene3D Phosphorylase Kinase; domain 1 561 646 - -
Aip09g00514 882 Pfam Malectin-like domain 30 342 IPR024788 -
Aip09g00514 882 Gene3D Transferase(Phosphotransferase) domain 1 647 867 - -
Aip09g00514 882 SMART serkin_6 574 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00514 882 SUPERFAMILY Protein kinase-like (PK-like) 550 842 IPR011009 -
Aip09g00514 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Aip09g00514 882 Gene3D Ribonuclease Inhibitor 358 481 IPR032675 -
Aip09g00514 882 ProSiteProfiles Leucine-rich repeat profile. 449 471 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00514 Aip-Chr9 5505959 5512270 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00514 1 882 Receptor kinase-like Gene Family AT1G51800 45.554 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip09g00514 Malectin_like 1.3e-91 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00514 - - ahf:112775583 1309.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00514 09 5505959 5512270 Aip09g00514 09 5505959 5512270 ECH
Aip08g00214 08 1528939 1533165 Aip09g00514 09 5505959 5512270 PCT
Aip09g00514 09 5505959 5512270 Aip08g00213 08 1522080 1528190 PCT