Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00510 ATGTACTCTGAAAATCTGATAGTGTCCGCTGAAAACCCTAGACCCTTCGCGTTTCAGCAACATCTGTCTTCTTCTTCGTCTACTACTAATTCGGCCAACGCGAAACCCATGAGCAATGAGATCGCACAGATGCCTCCCCCTTCCACTCTCGGTTGCAGGTTCAATGCTATGCTCAAGCTGCGCGACGACGAGCTCAGGGCCACCGCCGCTCACGTGCCCCCTCCGTCTACGGAAGAAATCGTTCAGCTGTACGAGATGCTGCTGTCAGAGCTCACGTCCAATCAGAAGCTCATTATCAACGATCTCACCTTCATCGCTGTGCACCAGAGGGAGCATGCCAGGGGCATCGCCGACGCTATCTGCGCTCGGATTCTCAAGGTGCCTGCAGAGCAAAAGCTTCCTTCACTCTATCTTTTGGACAGTATAGTGAAGAACTTTGGACAGGAATATGTTAGATACTTTGCATTACGCCTGCCCGAAGTTTTCTGTGAGGCATACAGGCAGGTTCAGCCTCATTTGCACCCTGCTATGCGCCATCTCTTTGGCACCTGGTCAGAAGTCTTTCCACCGTCTGCCTTACGCAAGATTGAAGCTGAGTTGCAACTTTCTCAAGTAGTTAATAATAGTCAATCGTCCAACATGAATCCCCTCAGAGCATCTGAATCTCCTAGTCCAAGTCATGGCATACATGTAAATCCAAAGTACCTGCAGCAGTTGGAGCGCTCAACTGTGGATAGTacaagtgggaaaaaatggtgtggcttattcgtcggggatgattgtgtgcaagaggagctgcttgaaaaagctgttccaggagatgatgatggtgaaaggaaaatgaactttgcatggcgggtggacaagatggaagcagacattagaaatctgaaattcatgactcaagttcttgggtttgggttgttggtagttgtagtttttgtaggaatggtgctcttaaagcgttga 969 0.3818 MYSENLIVSAENPRPFAFQQHLSSSSSTTNSANAKPMSNEIAQMPPPSTLGCRFNAMLKLRDDELRATAAHVPPPSTEEIVQLYEMLLSELTSNQKLIINDLTFIAVHQREHARGIADAICARILKVPAEQKLPSLYLLDSIVKNFGQEYVRYFALRLPEVFCEAYRQVQPHLHPAMRHLFGTWSEVFPPSALRKIEAELQLSQVVNNSQSSNMNPLRASESPSPSHGIHVNPKYLQQLERSTVDSTSGKKWCGLFVGDDCVQEELLEKAVPGDDDGERKMNFAWRVDKMEADIRNLKFMTQVLGFGLLVVVVFVGMVLLKR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00510 322 MobiDBLite consensus disorder prediction 20 46 - -
Aip09g00510 322 ProSiteProfiles CID domain profile. 76 204 IPR006569 -
Aip09g00510 322 Pfam CID domain 86 194 IPR006569 -
Aip09g00510 322 CDD CID_Pcf11 81 200 - -
Aip09g00510 322 SMART 558neu5 79 201 IPR006569 -
Aip09g00510 322 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 48 246 - -
Aip09g00510 322 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 48 246 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Aip09g00510 322 Gene3D - 73 203 IPR008942 -
Aip09g00510 322 SUPERFAMILY ENTH/VHS domain 75 200 IPR008942 -
Aip09g00510 322 MobiDBLite consensus disorder prediction 20 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00510 Aip-Chr9 5421728 5424285 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00510 28 247 C2H2 Transcription Factor Family AT4G04885 59.276 1.08e-74 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00510 K14400 - gmx:100787354 336.65