Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00504 ATGGCAACTTCTCTTTTTCTACTGCTTGGAGCTCTTTCTTTCATAGCAACGATCCAAGGCCAGGATCAATCAGGATTTATTAGCATAGATTGTGGACTACCTGAAAATTACAGCTACGTTGAAAAGAATACAGGAATCAGTTACATTTCAGATGCTAATTTCATTGATTCTGGTGTGAGTAAGATTGTGTCGCCTCAAGATAAGGCTACTCATCAACAATATTTTACTTACCTTCGAAGCTTTCCTTATGGAACAAGAAACTGTTACAGAATAAATAATGTAACCATCAACACTGAATATTTAATCAGAACTAGTTTTTTGTATGGAAACTATGACGGTCTAAATAAGCTCCCACAGTTTGAAGTTCATGTTGGAACTAATTTGTGGGACACATTGAAATTCTCGGATGCATCAGTGAGCATATACAGAGAGCTCTCTCACTCTCCAACAAGGGATTATGTAGATATCTGTCTGGTTAACATAGGCACTGGCACACCATTCATTTCGGCTATAGAATTGAGGATTCTTGAGAAGAATAATGGTCCCAGCTCTTCCTCAGTTGCACGTCTCAAAGGATTAGACTTGGGCAGCAAGAACAATTCAACATGCAGGTACAGAGATGACATATATGACTGCTTATGGGAGCCTTATTCCGTGAATGGGTGGAGACAGTTAATCAGCACAAATATTGATCCTAATCCAACTCAGAAAAAGGCAGATATTGATAATATTTATGTTCCACCAGCAAGTGTGATGAGAACAGCCGCTACACCAAGAAATGCAAGAGATTCTTTGGATTTCTACTTTCACTTGGATTATGTTGCACACATATATCATGTCAGATTCTATTTTGCTGAGGTACAAAAGCTGTCAGCAAATGAAAGTAGATCATTCAACATCAGCGTCAATGGCAATTATTGGGAAGGACCCATTGTACCCACATACAATCAAACAGTTTTCTACGATTTTTTCAGTACATATTTTGAAAGAGTTAGTGAATATCGATTCTCACTTCTTCCTACAGAGTTCTCTACCCTTCCTCCTATCACCAACGCTATTGAGATTTTTCTTTTTAAGGATTTCTCACAGCCACAAACTCAAAATGATCAAGTTGATGCTATGAGAAATATCAAGATTGCTTATAAGGTGTCAAAAAATTGGCAAGGAGATCCATGTGCCCCTGTAGCATACAAGTGGGACGGTCTAAATTGTAGTTCCGTTGGTACTTTAAAAATCACAGCCTTGAATTTGTCTTCTAGTGGACTAACGGGACAAATTGTATATTATATCGCCAAGCTTACTGACTTAGAGTCCTTGGATTTATCAAATAATAGCTTAAACGGGGAGATACCTGATTTTCTGGCAGACCTGCCATCACTTAAAGTCCTAAACTTGCATAATAACAACCTCACAGGTCAAGTTCCGAATGCACTCATCCAAAGATCAAGTGAAGGAGTACTATCACTAAGGTTGGGGCAAAATCCAAATCTGCTATGTGAATCTGCTCTTTGTGACCAACAGACAAAGGATAAAAGCAAGAAAAATAACAGAGTTATTTATATACTAGCATCTATTTCTGCAATTTTGGTGCTCCTGCTGTTAGTTCTTGCAACGGTTAACATCATTTACATCAAAAAGAGAAAACCAAAAGATTATTTCAAAGTTCATAAGGAGTTTAGTGATCAAACTGGATCACAGTTGGAATCTAAGAGAAGACGGTATTCATTCAATGAAGTATCTAACATGACCAATAATTTCGAAAGAGTCCTTGGTAGAGGTGGATTTGGAACAGTTTACTATGGCATTATTGATGACATTCAAGTAGCTGTCAAGATGCTTTCGCAATCATCAGTACAAGGATATCAGCAATTTCTAGCAGAGGTTAATATTTTGATGAGGGTTCATCATAGGAATCTAACTTCCCTCATTGGATATTGCAACGAAGAAACCAACATAGCACTCATCTATGAATATATGGAAAATGGCAACTTAGAAGAACATCTTTTGGAGAAAAATAGCAGGACAAAGTTGTTCAATTGGGAAGAAAGGCTCACTATAGCTATGGATGCAGCCCAAGGACTTGAGTATCTACATAACGGTTGTAAGCCACCTATAATCCACAGAGATGTGAAATGTACAAACATTTTACTAAATGAAAATTTCCAAGCGAAAATGTCTGACTTAGGTTTGTCCAGAAGCATTCCAGTTGACGGCGGCACACATGTAACAACTGTCATTGCAGGGACTCCTGGTTACTTGGATCCAGAGTACCAAGTATCAAATAGGCTAACAGAGAAAAGTGACGTTTATAGTTTTGGGGTAGTTTTATTGGAGATAATCACAGGTAAACCAGCAATACTTAAAGCGGTTGAGGGGAAAATTCACATAAGTGAGTGGGTTAAATCTATGCTTGCAAAAGGTGATGTAAAATGTATTGTTGATACAAGATTACAAGGAGATTTTGAGAGTAGTTCTGTTTGGAGAGCTGTTGAAATAGCAATGGCTTCTGTGTCCAATAAGTCCTCCAAAAGACCATACATGACTGATATTGTGACCGAGCTAAAGGAATGTTTGGCTATGGAGTTGGCTCGAAAACTTAACAGTTGCGAAACCATGACTATGAATTTGGCTACAGAGTCAGAAAGCAGCTCCTTGGCTAGTTCCATAATGATGTGTAAAACAGAAATGGCTGGATCTTAA 2700 0.38 MATSLFLLLGALSFIATIQGQDQSGFISIDCGLPENYSYVEKNTGISYISDANFIDSGVSKIVSPQDKATHQQYFTYLRSFPYGTRNCYRINNVTINTEYLIRTSFLYGNYDGLNKLPQFEVHVGTNLWDTLKFSDASVSIYRELSHSPTRDYVDICLVNIGTGTPFISAIELRILEKNNGPSSSSVARLKGLDLGSKNNSTCRYRDDIYDCLWEPYSVNGWRQLISTNIDPNPTQKKADIDNIYVPPASVMRTAATPRNARDSLDFYFHLDYVAHIYHVRFYFAEVQKLSANESRSFNISVNGNYWEGPIVPTYNQTVFYDFFSTYFERVSEYRFSLLPTEFSTLPPITNAIEIFLFKDFSQPQTQNDQVDAMRNIKIAYKVSKNWQGDPCAPVAYKWDGLNCSSVGTLKITALNLSSSGLTGQIVYYIAKLTDLESLDLSNNSLNGEIPDFLADLPSLKVLNLHNNNLTGQVPNALIQRSSEGVLSLRLGQNPNLLCESALCDQQTKDKSKKNNRVIYILASISAILVLLLLVLATVNIIYIKKRKPKDYFKVHKEFSDQTGSQLESKRRRYSFNEVSNMTNNFERVLGRGGFGTVYYGIIDDIQVAVKMLSQSSVQGYQQFLAEVNILMRVHHRNLTSLIGYCNEETNIALIYEYMENGNLEEHLLEKNSRTKLFNWEERLTIAMDAAQGLEYLHNGCKPPIIHRDVKCTNILLNENFQAKMSDLGLSRSIPVDGGTHVTTVIAGTPGYLDPEYQVSNRLTEKSDVYSFGVVLLEIITGKPAILKAVEGKIHISEWVKSMLAKGDVKCIVDTRLQGDFESSSVWRAVEIAMASVSNKSSKRPYMTDIVTELKECLAMELARKLNSCETMTMNLATESESSSLASSIMMCKTEMAGS 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00504 899 ProSiteProfiles Protein kinase domain profile. 584 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00504 899 Gene3D Ribonuclease Inhibitor 371 486 IPR032675 -
Aip09g00504 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
Aip09g00504 899 Gene3D Phosphorylase Kinase; domain 1 571 658 - -
Aip09g00504 899 Pfam Malectin-like domain 29 356 IPR024788 -
Aip09g00504 899 ProSitePatterns Protein kinases ATP-binding region signature. 590 611 IPR017441 GO:0005524
Aip09g00504 899 PANTHER PUTATIVE-RELATED 12 875 - -
Aip09g00504 899 SUPERFAMILY L domain-like 396 492 - -
Aip09g00504 899 ProSiteProfiles Leucine-rich repeat profile. 435 458 IPR001611 GO:0005515
Aip09g00504 899 Gene3D Transferase(Phosphotransferase) domain 1 659 880 - -
Aip09g00504 899 SUPERFAMILY Protein kinase-like (PK-like) 566 854 IPR011009 -
Aip09g00504 899 Pfam Leucine rich repeat 413 470 IPR001611 GO:0005515
Aip09g00504 899 Pfam Protein tyrosine and serine/threonine kinase 586 853 IPR001245 GO:0004672|GO:0006468
Aip09g00504 899 PRINTS Leucine-rich repeat signature 436 449 - -
Aip09g00504 899 PRINTS Leucine-rich repeat signature 457 470 - -
Aip09g00504 899 CDD STKc_IRAK 590 856 - -
Aip09g00504 899 Gene3D - 196 323 - -
Aip09g00504 899 PANTHER OS07G0107800 PROTEIN-RELATED 12 875 - -
Aip09g00504 899 SMART serkin_6 584 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00504 Aip-Chr9 5344426 5349658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00504 1 886 Receptor kinase-like Gene Family AT1G51850 44.044 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip09g00504 Malectin_like 2.2e-89 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00504 - - ahf:112712814 1640.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00504 09 5344426 5349658 Aip09g00504 09 5344426 5349658 ECH