Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00484 ATGGAGAGAGCAATAATAATATACTACGGGGTTCTGCTTTTAACTCTCTTATGTGCCTCCTTTATCTACGCACTTGTACCCAATACCACTAATATTCCAGGTTTCATAACCATTGATTGTGGATCGAGCAAAGAATACTTGGACGAAGAAACTGGAATTTGGTACGAGACGGACAAAAGCTTAGTAGAAACAGGAAAGAATTGGAAGGTTCCAGGGAGTTCAAATTTAAACGATCCATACTTCGGAAAACCATCAAGAACGGTGAGATGCTTTCCGGAGGGAGTGAGAAACTGTTACACACTAAGAGCGCCACAACAACAGAGGTACAGAGATGATGTTTATGACCGGATTTGGAGGTATGATCGCGACGTAGATACTTGGCGAAGCTTGGTATTAGATGATAACTCGACGGCCATTGATGTTGATGCTTACAAGTTACCATCCCAAGTAATGAAAACTGCTGCGCAATCACTGAATATGTCGCATCCCTTAGAATTGGGTCTCTCCACTTTGCTAATAGATCTTGATGACGCTACAGAATATTATGTGTACTTTCACTTTGTGGAAATTCAGAAACTCACGGCTGGGAAAAAAAGATTAATTAACATAGCCCTTAACTCGCAAAGCATACTCTCACAACCCTTGGTTCTTGAATACCTGAAACCAGTTACTGTTGGTTCTTCATACACAGCACAAGTTAATGCTACTTTTAGCATTAGTGCAGCGTTAGGATCGGAAGCTCCTCCTATCCTCAACGCCTTTGAGGTCTATAAGTTGATCACGCAAATTGATTCTCCAACTGATCCAAGAGATGTTGGTGGTATGAGGGACATCAAAAGTGCGTACCAGATATCTAGGTTAAGTTGGCAAGGAGATCCATGTCTTCCAGATCAATTTGCATGGGAGGGTCTCACTTGCAACTATCAAACCAATCCAAGGATCACGTCATTGAATCTGAGCTCAAGCAAACTGAGAGGGAAGATAAATTCATCATTCTCATATCTCACGGAACTAGAATACTTGGATTTATCTAATAACGAATTGGAAGGATCTCTGCCTGAATTTTTGGCAGACTTGTCAAGGTTAAAAGTTCTTAATTTGACAGGAAACAACCTTTCGGGTTTAATTCCTAAGGCTCTCCGAAAGAAGGTTGCAGATGCAAGTTTGCAATTAAGTGTTGGTGGTAATCCAAATCTCTGCGTAAAGGATTCATGCAACAATAAGAAGTTTGTTACACCACTCATGGCATCTCTTGCAGCAGCTTTAATTTTAATCCTTTTGATCGCTGGATTTTGGATATTTCAAAGAAGACGAAAACAAAAAGCACATATTATTAAAGAGGGAGCATCGTTGAAATTAAAACAAGCAGCATTCACTTACAATGAGATTCTCTCTATCACTGATAACTTCAAAACAATGATTGGAGAAGGAGGATTTGGAAAAGTTTATTTTGGCATTTTACCGGATCATACTCAAGTTGCTATCAAGTTGCTTTCTCCATCATCACGGCAAGGTTATACGGAGTTTCAATCAGAGGTACATCTTCATAGCCTTATACGTCATAGGAACTTAGTCTCTCTCGTTGGGTATTGTGATGAAGGAGAGAATAAAGCATTGATTTATGAATATATGTCCAATGGCAATCTCCGGCAACATTTGTCAAGGGAAAACCCATATGTGTTGAATTGGAATGAGAGACTCAACATAGCAATTGATGCAGTGAATGGACTAAATTATTTGCATAATGGTTGCAATCCATCAATCGTACATAGAGATTTGAAGACTTCAAATATATTGCTAGATCAGTGGAAGCATGCTAAGATAGCTGATTTTGGTCTAAGTAGAGCTTTTCGTAATGATATTGATTCTCACATATCAACTTGTCCTGCTGGTACCCCAGGTTATATTGATCCAGAAAGAAGAAGAAAATGGAACACCCAATAA 1944 0.3925 MERAIIIYYGVLLLTLLCASFIYALVPNTTNIPGFITIDCGSSKEYLDEETGIWYETDKSLVETGKNWKVPGSSNLNDPYFGKPSRTVRCFPEGVRNCYTLRAPQQQRYRDDVYDRIWRYDRDVDTWRSLVLDDNSTAIDVDAYKLPSQVMKTAAQSLNMSHPLELGLSTLLIDLDDATEYYVYFHFVEIQKLTAGKKRLINIALNSQSILSQPLVLEYLKPVTVGSSYTAQVNATFSISAALGSEAPPILNAFEVYKLITQIDSPTDPRDVGGMRDIKSAYQISRLSWQGDPCLPDQFAWEGLTCNYQTNPRITSLNLSSSKLRGKINSSFSYLTELEYLDLSNNELEGSLPEFLADLSRLKVLNLTGNNLSGLIPKALRKKVADASLQLSVGGNPNLCVKDSCNNKKFVTPLMASLAAALILILLIAGFWIFQRRRKQKAHIIKEGASLKLKQAAFTYNEILSITDNFKTMIGEGGFGKVYFGILPDHTQVAIKLLSPSSRQGYTEFQSEVHLHSLIRHRNLVSLVGYCDEGENKALIYEYMSNGNLRQHLSRENPYVLNWNERLNIAIDAVNGLNYLHNGCNPSIVHRDLKTSNILLDQWKHAKIADFGLSRAFRNDIDSHISTCPAGTPGYIDPERRRKWNTQ 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00484 647 Gene3D Transferase(Phosphotransferase) domain 1 544 646 - -
Aip09g00484 647 PANTHER OS07G0107800 PROTEIN-RELATED 29 103 - -
Aip09g00484 647 Gene3D - 103 260 - -
Aip09g00484 647 SMART LRR_typ_2 359 382 IPR003591 -
Aip09g00484 647 SMART LRR_typ_2 335 358 IPR003591 -
Aip09g00484 647 PANTHER OS07G0107800 PROTEIN-RELATED 106 641 - -
Aip09g00484 647 SMART serkin_6 468 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00484 647 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 106 641 - -
Aip09g00484 647 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 29 103 - -
Aip09g00484 647 ProSitePatterns Protein kinases ATP-binding region signature. 474 496 IPR017441 GO:0005524
Aip09g00484 647 SUPERFAMILY Protein kinase-like (PK-like) 455 644 IPR011009 -
Aip09g00484 647 PRINTS Leucine-rich repeat signature 359 372 - -
Aip09g00484 647 PRINTS Leucine-rich repeat signature 338 351 - -
Aip09g00484 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Aip09g00484 647 Gene3D Phosphorylase Kinase; domain 1 432 543 - -
Aip09g00484 647 SUPERFAMILY L domain-like 291 379 - -
Aip09g00484 647 ProSiteProfiles Protein kinase domain profile. 468 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00484 647 Pfam Malectin-like domain 107 258 IPR024788 -
Aip09g00484 647 Gene3D Ribonuclease Inhibitor 276 394 IPR032675 -
Aip09g00484 647 Pfam Leucine rich repeat 312 372 IPR001611 GO:0005515
Aip09g00484 647 Pfam Protein kinase domain 471 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00484 647 ProSiteProfiles Leucine-rich repeat profile. 337 360 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00484 Aip-Chr9 5145630 5162935 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00484 108 647 Receptor kinase-like Gene Family AT1G51830 42.606 1.06e-141 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip09g00484 Pkinase 2.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00484 - - mtr:MTR_8g015040 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00484 09 5145630 5162935 Aip09g00484 09 5145630 5162935 ECH