Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00482 ATGGTTCTTGTTGGCGCATTATTGTGGTCAAGCATGGAGAGAGCAATAATACACTGGATTCTGGTTTTAACCTTATGTGCTTTCCTTATACTCGTTAAAGGAGCAGTAGCTGCTATGGCATCCAGTACTGCTGCTAATGCTCCAGGGTTCATCACGATTGATTGTGGATCGAACAGAGAATACTTGGACAAAGGAACTGGAATTTGGTACGAGAGCGATAAAAAATTTGTAGAAACAGGAGAGAATTGGAAAGTAGCAGGGAGTTCGAATTTAAACGATCCATACTTTGGGAAAGCGTCGAGAACGGCAAGATGCTTTCCGGAAGGAGTGAGGAACTGCTACACTCTGATGAGAGTGCCACAAAAACAAAGGTATCTAATTAGGGCGATATTCATATATAACAACTATGATGGCAAAAATCAAAACATGACATTTGATATTCATCTTGGAGTGAATCTGTGGGACACAGTGAGTCTTGATTCTGAGACTTATTGGTCTTTCACTGAGATTATATACACTCACACCAGTGACTCCATACAAATTTGTCTTGTAAAAACTGCCCAATCCACTCCTTGCATTTCTTCTTTGGAACTACGCCCTTTGAGTAGCTCTGTTTATGCTCTCAACTCAACCACCAATTCACGGCTACTGTTGTATTTACGGACTGACATTGCCTCCCTTGACGCACCTGAGTATGTCAGGTACAAAGATGATGTATATGACCGGATTTGGCGTTATGATCGCGATGTAGATAGTTGGCAAAGCTTGGAATTAGATAACTACTCAACCGCCATCGATATTGGAAGCAATAATAAATCTGATTCTTATAAAGTGCCGTCCAAAGTAATGAGGAGTGTTGCAACATCAGAGAGTGTTTCTGATGCCTTGGAATTTAGTTATAGCACTGTGCTTGGAATCGAACTTGAAAACTCTAGCGAGTATTATACATACTTCCACTTTGCTGAAATTGAGCAACTTGGGGTTGGAAAAAAAAGAATAATTGACATCACCCTTAACTCGCAAAGCATTCTCTCAGAACCTTTGGTTCTTGAATACTTGAAACCAGTCACTGTTAGTTCTGCATATACAGCACATGGTGATATTAATGTTAGCATTAGTGCAACTTCAGGATCAGAAGCTCCCCCAATCCTCAACGCCCTTGAGATCTATCGGTTCGTACCGGAAATTGATTTCCCAACTGACGCAAAAGACGTGTCTGCAATAGAGGACATAAAAAGCGTTTACCAAATTACAAAGTTGAATTGGCAAGGTGATCCATGTCGTCCTACACAGTTTACATGGGAGGGTCTCAATTGTACCTCACACAAAAATGCAAGGATCAAATCTTTGAACCTTAGGTCAAGCAAATTGAGTGGGCAGATAAATATTTCGTTCTCATATTTTACAGAACTAGAACTTTTTGTACCGGGAGTACCGGTACTACATGTGGCTGATAATCCTAATCTATGTATGAAATATTCATGCAATAAGAAGAACATTTTTGTACCACTTATTGCATCACTTCCAGCTTTAATTGTCATCCTTTTCATTGTCCTTGGATTTTGGATATCAAAAAGAAGACAGAAAGACAAGTTGGATTCTAGAAAAGAAGTATGTTTGGAGTCAAAACAAAAAGCATTCAATTATACTGAGATTCTGAATATTACTGATAACTTCAAAACAATAATTGGAGAAGGAGGATTCGGAAAAGTTTATCTTGGCCTTCTACAAGATCACACTCAAGTTGCCGTCAAATTGCTTTCGGTATCTTCCAGACAAGGCTACAAAGAATTCCAATCAGAGGTAGAACTCCATAGTAGTATTCGTCATAGGAACTTGGTGTCCCTCGTTGGCTATTGTGATGAAGGAGAGATTAAAGCACTGATTTATGAATACATGGCAAATGGAAATCTCCATCGACATTTATCAAAGCAACATCCAAATGTGTTGAAGTGGGATGAGAGACTTAATATTGCAATTGATGTGGCGAATGGACTAGATTATTTGCATAATGGTTGTAAGACACCTATTGTACATAGAGATTTGAAGACTTCAAACATATTACTAGATAAGTGGAATCATGCCAAGATATCTGATTTTGGTCTTAGCAGAGCTTTTCCTAATGATGATGATTCTCACATATCAACTCGCCCTGCTGGCACACCAGGCTACATTGATCCAGAGTTTCATAGGGTTGGATACTTGAATAAAAAGAGCGACGTTTATAGCTTGGGAATAATTCTGCTTGAATTGATGACGGGTGAAGCTGCAATCATAGTAAGAGATGATGGTGCCATTCACATACTTGAATGGGTTAGGCCCATACTTGAAAGAGGTGATGATATTCAAAACATTGTTGATTCAAGATTGTTGCAACAAGGAGACTTTAATGTTGACTCTTTAAGGAAAGTTTTTGAGATTGCCTTGTGTTGTACAAGAGTTGCAGCTCAAAGACCAGACATAAGTCAAGTCCTTTTAGACCTAAAAGATTTCTTATTTCTTGAAATGGTTAGCATTGCACCTCACATGTCTATGCAACTTGAAACTGATGAATTTTCTCTTGTAGGAAGGTAA 2574 0.3881 MVLVGALLWSSMERAIIHWILVLTLCAFLILVKGAVAAMASSTAANAPGFITIDCGSNREYLDKGTGIWYESDKKFVETGENWKVAGSSNLNDPYFGKASRTARCFPEGVRNCYTLMRVPQKQRYLIRAIFIYNNYDGKNQNMTFDIHLGVNLWDTVSLDSETYWSFTEIIYTHTSDSIQICLVKTAQSTPCISSLELRPLSSSVYALNSTTNSRLLLYLRTDIASLDAPEYVRYKDDVYDRIWRYDRDVDSWQSLELDNYSTAIDIGSNNKSDSYKVPSKVMRSVATSESVSDALEFSYSTVLGIELENSSEYYTYFHFAEIEQLGVGKKRIIDITLNSQSILSEPLVLEYLKPVTVSSAYTAHGDINVSISATSGSEAPPILNALEIYRFVPEIDFPTDAKDVSAIEDIKSVYQITKLNWQGDPCRPTQFTWEGLNCTSHKNARIKSLNLRSSKLSGQINISFSYFTELELFVPGVPVLHVADNPNLCMKYSCNKKNIFVPLIASLPALIVILFIVLGFWISKRRQKDKLDSRKEVCLESKQKAFNYTEILNITDNFKTIIGEGGFGKVYLGLLQDHTQVAVKLLSVSSRQGYKEFQSEVELHSSIRHRNLVSLVGYCDEGEIKALIYEYMANGNLHRHLSKQHPNVLKWDERLNIAIDVANGLDYLHNGCKTPIVHRDLKTSNILLDKWNHAKISDFGLSRAFPNDDDSHISTRPAGTPGYIDPEFHRVGYLNKKSDVYSLGIILLELMTGEAAIIVRDDGAIHILEWVRPILERGDDIQNIVDSRLLQQGDFNVDSLRKVFEIALCCTRVAAQRPDISQVLLDLKDFLFLEMVSIAPHMSMQLETDEFSLVGR 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00482 857 Gene3D Phosphorylase Kinase; domain 1 520 632 - -
Aip09g00482 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Aip09g00482 857 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 40 472 - -
Aip09g00482 857 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 481 841 - -
Aip09g00482 857 ProSiteProfiles Protein kinase domain profile. 557 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00482 857 Gene3D Transferase(Phosphotransferase) domain 1 633 837 - -
Aip09g00482 857 CDD STKc_IRAK 563 824 - -
Aip09g00482 857 SUPERFAMILY Protein kinase-like (PK-like) 536 828 IPR011009 -
Aip09g00482 857 SMART serkin_6 557 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00482 857 ProSitePatterns Protein kinases ATP-binding region signature. 563 585 IPR017441 GO:0005524
Aip09g00482 857 PANTHER OS07G0107800 PROTEIN-RELATED 40 472 - -
Aip09g00482 857 PANTHER OS07G0107800 PROTEIN-RELATED 481 841 - -
Aip09g00482 857 Pfam Protein tyrosine and serine/threonine kinase 559 824 IPR001245 GO:0004672|GO:0006468
Aip09g00482 857 Pfam Malectin-like domain 53 391 IPR024788 -
Aip09g00482 857 Gene3D - 230 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00482 Aip-Chr9 5114042 5128637 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00482 17 835 Receptor kinase-like Gene Family AT1G51880 37.416 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip09g00482 Malectin_like 4e-85 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00482 - - ahf:112777738 1534.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00482 09 5114042 5128637 Aip09g00482 09 5114042 5128637 ECH