Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00479 ATGGATATGAATAGTAGGAAAATAGCAGTTATTCATGTTGTCCTTGTTGTGTTTGCAAGTGGGTATGGAGAAGGAGAAGCACAAGAAACACCAACAACAACAACATTAGTGCCAGCAGTGATAACATTTGGAGATTCAGTAGTGGATGTTGGAAATAATGTGAATCTCAACACTCTCTTCAAGGCTGATTACCTTCCTTATGGCAAAGATTTTGGTAACCACAAACCCAATGGCAGGTTTTGTAATGGCAAACTAGCTACTGATGTTACTGCTGAAACACTGGGATTTAAGAATTCTGCACATCCATACCTTAGTCCACGAGCATCAGGGAAGAACCTCCTTAGAGGAGTTAACTTTGCTTCAGCTGCTTCTGGTTATGATGACAACACTGCTATTTTGCATCATGCTATCCCTTTGTCACAACAATTAAATTATTACAAGGAATACCAAAGGAAACTGGCACGTGTAGTTGGAAGTAACAAATCAGCATCAATTATCAATGAAGCTTTGTACTTATTGGCTACTGGAAGTGGTGATTTTCTTCATAATTATTATATCAATCCTAAGCTCAACAAAACCACCTTCACTCCTGATAAGTACTCCTCCTACCTTGTTGCTGCATTTGAATCCTTCATTAAGGATTTGTATGGATTAGGAGCGAGGAGAATTGGAGTGGTTTCACTCCCACCATTGGGTTGTCTACCTGCTACAAGAACTTTATTTAGTTCCCATGATCACAATATTATTAATGGCGGATGTGTCTCAAGCATCAATCATGATGCTCAAACATTCAACAACAAACTCAACTCATCTGCCTTATTTCTTCAAAAACAACTTCTTGGTCTTAAGATTGTTGTCTTTGATATTTTCAAGCCTCTTTATGACCTTGTTCAGTCTCCATCAAAATTTGGTTTTGTGGAGGCAAGCAAAGGTTGCTGTGGTAGAGGGAGTGAAAGAATAAGAGTGTTCTTGTGCAATCCAAAATCATCAAGAACTTGCTCTAATGCAACTCAGTATGTGTTTTGGGATGGTGTTCATCCTTCAGAAGCTGCTAACAAAATTTTAGCTGATTCAATGCTTCTTCAAGGCATATCTCTTGTCACATAA 1107 0.3848 MDMNSRKIAVIHVVLVVFASGYGEGEAQETPTTTTLVPAVITFGDSVVDVGNNVNLNTLFKADYLPYGKDFGNHKPNGRFCNGKLATDVTAETLGFKNSAHPYLSPRASGKNLLRGVNFASAASGYDDNTAILHHAIPLSQQLNYYKEYQRKLARVVGSNKSASIINEALYLLATGSGDFLHNYYINPKLNKTTFTPDKYSSYLVAAFESFIKDLYGLGARRIGVVSLPPLGCLPATRTLFSSHDHNIINGGCVSSINHDAQTFNNKLNSSALFLQKQLLGLKIVVFDIFKPLYDLVQSPSKFGFVEASKGCCGRGSERIRVFLCNPKSSRTCSNATQYVFWDGVHPSEAANKILADSMLLQGISLVT 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00479 368 Gene3D SGNH hydrolase 28 363 IPR036514 -
Aip09g00479 368 CDD SGNH_plant_lipase_like 38 360 IPR035669 -
Aip09g00479 368 Pfam GDSL-like Lipase/Acylhydrolase 40 357 IPR001087 GO:0016788
Aip09g00479 368 SUPERFAMILY SGNH hydrolase 159 359 - -
Aip09g00479 368 PANTHER GDSL ESTERASE/LIPASE APG 8 367 - -
Aip09g00479 368 PANTHER GDSL ESTERASE/LIPASE EXL3 8 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00479 Aip-Chr9 5087038 5090969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00479 29 359 Acyl Lipid Metabolism Gene Families AT4G10950 31.045 9.29e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00479 - - gsj:114422362 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00479 09 5087038 5090969 Aip09g00479 09 5087038 5090969 ECH
Aip08g00208 08 1440217 1442061 Aip09g00479 09 5087038 5090969 PCT