Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00438 ATGCATTCGGAGGAGAACATTATCTATgtgaagcgggtgaaggaagaaagggagcattccgacccatggcatccgacggagCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGTGCCCTCAATCATCGCTGCCACCGGAATCGGAACCACTCCCGCCAGCTTCTCCTCCATTTCCGTCTCCGTACGCGGCGGTGCTGGCTCTCCCTCTTCTCCTTCCTCAACCTCCGCAGCGTCTTCGCTCGACCACAAGTCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGCGCATACACACCGATGACGATGCTTCCGCCAAGGACGACGGCGTCTCCATGGGGCCCGCCGTTGGGTCCTTAGTGGGCCCCAGAGCTCCCGCGGGGCTCTGGGCCTTCCCGGTTAAGCCCGATTTTGGTCAAATTTGGAGTTTCACAGTGGCTGCTCCTCCGCCGGAGATGGTTGTGCAGTCGGCGGCGGTGTCGGTGTCTCAGCAGCAGCAAGCTTCTTTGTTCGTTCACTATCAGCATCAGCATCAGCAGCAGCAACAAGCCATGGGAGAAACTTTGGCGACGAGGCTGGGAAATTACCTTCTTGGACATCTGAATTTGCTGGCTTCTAAGTCAGGAGGGCCCGGAAAATCTTAG 663 0.54 MHSEENIIYVKRVKEEREHSDPWHPTELGHKSDGQTIEWLLRQAVPSIIAATGIGTTPASFSSISVSVRGGAGSPSSPSSTSAASSLDHKSLLAPTPFILGKRIHTDDDASAKDDGVSMGPAVGSLVGPRAPAGLWAFPVKPDFGQIWSFTVAAPPPEMVVQSAAVSVSQQQQASLFVHYQHQHQQQQQAMGETLATRLGNYLLGHLNLLASKSGGPGKS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00438 220 MobiDBLite consensus disorder prediction 66 87 - -
Aip09g00438 220 Pfam TCP family transcription factor 27 92 IPR017887 -
Aip09g00438 220 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 220 IPR005333 GO:0003700
Aip09g00438 220 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 27 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00438 Aip-Chr9 4592648 4594281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00438 27 218 TCP Transcription Factor Family AT5G23280 57.143 7.17e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip09g00438 TCP 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00438 K16221 - cpap:110813909 219.164